Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 RN7SL456P-201ENST00000469290 295 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 RN7SL688P-201ENST00000471754 275 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 RN7SL643P-201ENST00000471845 291 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 AL122013.1-201ENST00000473054 801 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 RPL7AP6-201ENST00000477943 801 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 RPL12P30-201ENST00000488389 499 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 RPS27P20-201ENST00000492051 246 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 RPL23AP80-201ENST00000495605 424 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 SNORD67.1-201ENST00000516618 108 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 RNU6-572P-201ENST00000516724 80 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 AC068631.3-201ENST00000538831 225 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 AC106785.1-201ENST00000565935 262 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 AC233702.9-201ENST00000581528 203 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR3140-201ENST00000583685 90 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 AC012493.2-201ENST00000595083 291 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 RN7SL82P-201ENST00000611435 237 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 AL161931.1-201ENST00000612768 246 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 PCGEM1.1-201ENST00000613431 131 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 RN7SL628P-201ENST00000619139 237 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 AC007347.2-201ENST00000623044 180 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 AC018692.3-201ENST00000623929 123 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 AC069542.2-201ENST00000624816 216 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 DLST-216ENST00000626051 252 ntTSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR4773-1-201ENST00000637203 78 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR3529-201ENST00000637713 78 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 SLC8A1-209ENST00000408028 2898 ntTSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 AL356489.2-201ENST00000566968 3528 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 HLF-210ENST00000575345 3589 ntTSL 2 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 ELP3-219ENST00000537665 3053 ntTSL 2 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 MAPK10-281ENST00000641170 3070 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 AC016717.2-201ENST00000609089 5141 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 AC027575.3-201ENST00000583058 2747 ntBASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
KRTAP4-4Q9BYR3 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 MAPK10-377ENST00000642006 2752 ntBASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 WDR76-201ENST00000263795 3978 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 CNIH4-205ENST00000465271 4125 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms