Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPCS1Q9Y6A9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 BX119927.1-201ENST00000636596 1552 ntBASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 AL034346.1-201ENST00000568244 1277 ntBASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SPCS1Q9Y6A9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 AC021231.2-201ENST00000594613 730 ntBASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.06□□□□□ -0.32
SPCS1Q9Y6A9 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SPCS1Q9Y6A9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC13.05□□□□□ -0.32
SPCS1Q9Y6A9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC13.05□□□□□ -0.32
SPCS1Q9Y6A9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC13.05□□□□□ -0.32
SPCS1Q9Y6A9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SPCS1Q9Y6A9 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SPCS1Q9Y6A9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SPCS1Q9Y6A9 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SPCS1Q9Y6A9 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SPCS1Q9Y6A9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SPCS1Q9Y6A9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SPCS1Q9Y6A9 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.05□□□□□ -0.32
SPCS1Q9Y6A9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC13.05□□□□□ -0.32
SPCS1Q9Y6A9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms