Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 AD000864.1-201ENST00000624076 2295 ntBASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 AC053503.5-201ENST00000601508 636 ntBASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 SYT6-210ENST00000641643 1587 ntBASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRAPPC1Q9Y5R8 AC018695.7-201ENST00000624587 2492 ntBASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 AC103724.3-201ENST00000564481 992 ntBASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 AL033527.3-201ENST00000566366 1196 ntBASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
TRAPPC1Q9Y5R8 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC1Q9Y5R8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms