Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 AL161938.1-201ENST00000569833 2180 ntBASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGB3Q9Y5G1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB3Q9Y5G1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB3Q9Y5G1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB3Q9Y5G1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB3Q9Y5G1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB3Q9Y5G1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGB3Q9Y5G1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB3Q9Y5G1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGB3Q9Y5G1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB3Q9Y5G1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB3Q9Y5G1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGB3Q9Y5G1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB3Q9Y5G1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGB3Q9Y5G1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGB3Q9Y5G1 AC004264.1-201ENST00000608354 794 ntBASIC18.05■□□□□ 0.48
PCDHGB3Q9Y5G1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGB3Q9Y5G1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGB3Q9Y5G1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGB3Q9Y5G1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB3Q9Y5G1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGB3Q9Y5G1 AL135905.2-201ENST00000584934 1404 ntBASIC18.05■□□□□ 0.48
PCDHGB3Q9Y5G1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB3Q9Y5G1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGB3Q9Y5G1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 AC124016.1-201ENST00000609552 612 ntBASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 AC110285.5-201ENST00000611501 352 ntBASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGB3Q9Y5G1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 AC239809.2-201ENST00000415381 517 ntBASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 AC012618.2-201ENST00000428058 849 ntBASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.03■□□□□ 0.48
PCDHGB3Q9Y5G1 AP001412.1-201ENST00000608405 714 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms