Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.42■□□□□ 0.54
NDE1Q9NXR1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 YBX1P1-201ENST00000445822 960 ntBASIC18.41■□□□□ 0.54
NDE1Q9NXR1 RARRES2P4-201ENST00000514074 484 ntBASIC18.41■□□□□ 0.54
NDE1Q9NXR1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 AC099398.1-201ENST00000567919 2776 ntBASIC18.41■□□□□ 0.54
NDE1Q9NXR1 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NDE1Q9NXR1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 ANO7L1-203ENST00000602586 1720 ntBASIC18.4■□□□□ 0.54
NDE1Q9NXR1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 PKD1P1-201ENST00000458669 6805 ntBASIC18.4■□□□□ 0.54
NDE1Q9NXR1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDE1Q9NXR1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.39■□□□□ 0.54
NDE1Q9NXR1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NDE1Q9NXR1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
NDE1Q9NXR1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NDE1Q9NXR1 AL162741.1-201ENST00000565563 1558 ntBASIC18.39■□□□□ 0.53
NDE1Q9NXR1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDE1Q9NXR1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.39■□□□□ 0.53
NDE1Q9NXR1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NDE1Q9NXR1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.39■□□□□ 0.53
NDE1Q9NXR1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NDE1Q9NXR1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDE1Q9NXR1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NDE1Q9NXR1 KRT18P14-201ENST00000534205 1250 ntBASIC18.39■□□□□ 0.53
NDE1Q9NXR1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.39■□□□□ 0.53
NDE1Q9NXR1 AC131212.1-201ENST00000613771 668 ntBASIC18.39■□□□□ 0.53
NDE1Q9NXR1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NDE1Q9NXR1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NDE1Q9NXR1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
NDE1Q9NXR1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NDE1Q9NXR1 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDE1Q9NXR1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.39■□□□□ 0.53
NDE1Q9NXR1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDE1Q9NXR1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDE1Q9NXR1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDE1Q9NXR1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.39■□□□□ 0.53
NDE1Q9NXR1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDE1Q9NXR1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDE1Q9NXR1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDE1Q9NXR1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms