Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 CD177P1-201ENST00000606252 935 ntBASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 CR392000.1-201ENST00000624770 1228 ntBASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 HLA-A-209ENST00000638375 975 ntBASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NECTIN3Q9NQS3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 KSR1P1-201ENST00000446298 240 ntBASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 MIR4497-201ENST00000583208 89 ntBASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
NECTIN3Q9NQS3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 AL138781.2-201ENST00000617896 1843 ntBASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
NECTIN3Q9NQS3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NECTIN3Q9NQS3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.22■□□□□ 0.51
NECTIN3Q9NQS3 TREX1-205ENST00000625293 1783 ntBASIC18.22■□□□□ 0.51
NECTIN3Q9NQS3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
NECTIN3Q9NQS3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NECTIN3Q9NQS3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
NECTIN3Q9NQS3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NECTIN3Q9NQS3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NECTIN3Q9NQS3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NECTIN3Q9NQS3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NECTIN3Q9NQS3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NECTIN3Q9NQS3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.22■□□□□ 0.51
NECTIN3Q9NQS3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
NECTIN3Q9NQS3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.22■□□□□ 0.51
NECTIN3Q9NQS3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.22■□□□□ 0.51
NECTIN3Q9NQS3 AL445675.2-201ENST00000620291 557 ntBASIC18.22■□□□□ 0.51
NECTIN3Q9NQS3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
NECTIN3Q9NQS3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NECTIN3Q9NQS3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NECTIN3Q9NQS3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NECTIN3Q9NQS3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NECTIN3Q9NQS3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
NECTIN3Q9NQS3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN3Q9NQS3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN3Q9NQS3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.21■□□□□ 0.51
NECTIN3Q9NQS3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms