Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC22.14■■□□□ 1.14
EFCC1Q9HA90 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.14■■□□□ 1.14
EFCC1Q9HA90 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
EFCC1Q9HA90 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC22.14■■□□□ 1.14
EFCC1Q9HA90 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC22.14■■□□□ 1.13
EFCC1Q9HA90 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
EFCC1Q9HA90 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
EFCC1Q9HA90 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC22.14■■□□□ 1.13
EFCC1Q9HA90 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC22.14■■□□□ 1.13
EFCC1Q9HA90 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC22.14■■□□□ 1.13
EFCC1Q9HA90 AC009078.2-202ENST00000463353 338 ntBASIC22.14■■□□□ 1.13
EFCC1Q9HA90 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
EFCC1Q9HA90 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC22.14■■□□□ 1.13
EFCC1Q9HA90 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC22.14■■□□□ 1.13
EFCC1Q9HA90 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC22.14■■□□□ 1.13
EFCC1Q9HA90 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
EFCC1Q9HA90 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
EFCC1Q9HA90 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC22.14■■□□□ 1.13
EFCC1Q9HA90 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
EFCC1Q9HA90 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC22.14■■□□□ 1.13
EFCC1Q9HA90 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC22.14■■□□□ 1.13
EFCC1Q9HA90 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
EFCC1Q9HA90 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
EFCC1Q9HA90 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
EFCC1Q9HA90 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC22.14■■□□□ 1.13
EFCC1Q9HA90 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
EFCC1Q9HA90 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
EFCC1Q9HA90 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC22.13■■□□□ 1.13
EFCC1Q9HA90 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
EFCC1Q9HA90 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
EFCC1Q9HA90 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
EFCC1Q9HA90 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC22.13■■□□□ 1.13
EFCC1Q9HA90 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
EFCC1Q9HA90 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC22.13■■□□□ 1.13
EFCC1Q9HA90 AL645929.1-201ENST00000420084 975 ntBASIC22.13■■□□□ 1.13
EFCC1Q9HA90 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC22.13■■□□□ 1.13
EFCC1Q9HA90 TSSC2-201ENST00000450217 709 ntBASIC22.13■■□□□ 1.13
EFCC1Q9HA90 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC22.13■■□□□ 1.13
EFCC1Q9HA90 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
EFCC1Q9HA90 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC22.13■■□□□ 1.13
EFCC1Q9HA90 GXYLT1P4-201ENST00000613576 1192 ntBASIC22.13■■□□□ 1.13
EFCC1Q9HA90 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22.13■■□□□ 1.13
EFCC1Q9HA90 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC22.13■■□□□ 1.13
EFCC1Q9HA90 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
EFCC1Q9HA90 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC22.13■■□□□ 1.13
EFCC1Q9HA90 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC22.12■■□□□ 1.13
EFCC1Q9HA90 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
EFCC1Q9HA90 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
EFCC1Q9HA90 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
EFCC1Q9HA90 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
EFCC1Q9HA90 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC22.12■■□□□ 1.13
EFCC1Q9HA90 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
EFCC1Q9HA90 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC22.12■■□□□ 1.13
EFCC1Q9HA90 PPIH-202ENST00000372549 327 ntTSL 3 BASIC22.12■■□□□ 1.13
EFCC1Q9HA90 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC22.12■■□□□ 1.13
EFCC1Q9HA90 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
EFCC1Q9HA90 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC22.12■■□□□ 1.13
EFCC1Q9HA90 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
EFCC1Q9HA90 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC22.12■■□□□ 1.13
EFCC1Q9HA90 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.12■■□□□ 1.13
EFCC1Q9HA90 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
EFCC1Q9HA90 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
EFCC1Q9HA90 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
EFCC1Q9HA90 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
EFCC1Q9HA90 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
EFCC1Q9HA90 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
EFCC1Q9HA90 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
EFCC1Q9HA90 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC22.11■■□□□ 1.13
EFCC1Q9HA90 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC22.11■■□□□ 1.13
EFCC1Q9HA90 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC22.11■■□□□ 1.13
EFCC1Q9HA90 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC22.11■■□□□ 1.13
EFCC1Q9HA90 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC22.11■■□□□ 1.13
EFCC1Q9HA90 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
EFCC1Q9HA90 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
EFCC1Q9HA90 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
EFCC1Q9HA90 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
EFCC1Q9HA90 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
EFCC1Q9HA90 AC026471.1-201ENST00000564629 3026 ntBASIC22.11■■□□□ 1.13
EFCC1Q9HA90 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC22.11■■□□□ 1.13
EFCC1Q9HA90 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
EFCC1Q9HA90 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
EFCC1Q9HA90 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.11■■□□□ 1.13
EFCC1Q9HA90 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
EFCC1Q9HA90 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
EFCC1Q9HA90 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
EFCC1Q9HA90 HBZP1-201ENST00000354915 429 ntBASIC22.1■■□□□ 1.13
EFCC1Q9HA90 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC22.1■■□□□ 1.13
EFCC1Q9HA90 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
EFCC1Q9HA90 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
EFCC1Q9HA90 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
EFCC1Q9HA90 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
EFCC1Q9HA90 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
EFCC1Q9HA90 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
EFCC1Q9HA90 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
EFCC1Q9HA90 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
EFCC1Q9HA90 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
EFCC1Q9HA90 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
EFCC1Q9HA90 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
EFCC1Q9HA90 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
EFCC1Q9HA90 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms