Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 AL354751.1-201ENST00000412768 1863 ntBASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TUBB1Q9H4B7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 KRT8P41-201ENST00000533985 1514 ntBASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TUBB1Q9H4B7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBB1Q9H4B7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TUBB1Q9H4B7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBB1Q9H4B7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBB1Q9H4B7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBB1Q9H4B7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
TUBB1Q9H4B7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBB1Q9H4B7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBB1Q9H4B7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBB1Q9H4B7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBB1Q9H4B7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TUBB1Q9H4B7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBB1Q9H4B7 PRKY-204ENST00000533551 1019 ntBASIC18.34■□□□□ 0.53
TUBB1Q9H4B7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.34■□□□□ 0.53
TUBB1Q9H4B7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBB1Q9H4B7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBB1Q9H4B7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TUBB1Q9H4B7 AC026471.1-201ENST00000564629 3026 ntBASIC18.34■□□□□ 0.53
TUBB1Q9H4B7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TUBB1Q9H4B7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TUBB1Q9H4B7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
TUBB1Q9H4B7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TUBB1Q9H4B7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TUBB1Q9H4B7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TUBB1Q9H4B7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
TUBB1Q9H4B7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TUBB1Q9H4B7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
TUBB1Q9H4B7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.33■□□□□ 0.53
TUBB1Q9H4B7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TUBB1Q9H4B7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TUBB1Q9H4B7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TUBB1Q9H4B7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TUBB1Q9H4B7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.33■□□□□ 0.52
TUBB1Q9H4B7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.33■□□□□ 0.52
TUBB1Q9H4B7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TUBB1Q9H4B7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TUBB1Q9H4B7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.33■□□□□ 0.52
TUBB1Q9H4B7 AC233263.1-201ENST00000578059 224 ntBASIC18.33■□□□□ 0.52
TUBB1Q9H4B7 MTDHP1-201ENST00000605323 784 ntBASIC18.33■□□□□ 0.52
TUBB1Q9H4B7 AC092666.2-201ENST00000613287 246 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms