Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNF1Q9H3M0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.77■□□□□ 0.92
KCNF1Q9H3M0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KCNF1Q9H3M0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.77■□□□□ 0.92
KCNF1Q9H3M0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KCNF1Q9H3M0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
KCNF1Q9H3M0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
KCNF1Q9H3M0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KCNF1Q9H3M0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
KCNF1Q9H3M0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
KCNF1Q9H3M0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
KCNF1Q9H3M0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
KCNF1Q9H3M0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.76■□□□□ 0.91
KCNF1Q9H3M0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 AC084018.2-201ENST00000613093 2607 ntBASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 AC012317.2-201ENST00000623305 2251 ntBASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 KRT19P1-201ENST00000405746 1186 ntBASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNF1Q9H3M0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNF1Q9H3M0 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNF1Q9H3M0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KCNF1Q9H3M0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KCNF1Q9H3M0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
KCNF1Q9H3M0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNF1Q9H3M0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNF1Q9H3M0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNF1Q9H3M0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNF1Q9H3M0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNF1Q9H3M0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
KCNF1Q9H3M0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNF1Q9H3M0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNF1Q9H3M0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNF1Q9H3M0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.74■□□□□ 0.91
KCNF1Q9H3M0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNF1Q9H3M0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.74■□□□□ 0.91
KCNF1Q9H3M0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNF1Q9H3M0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
KCNF1Q9H3M0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNF1Q9H3M0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KCNF1Q9H3M0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KCNF1Q9H3M0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KCNF1Q9H3M0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNF1Q9H3M0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms