Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.15■□□□□ 0.66
VPS11Q9H270 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
VPS11Q9H270 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.15■□□□□ 0.66
VPS11Q9H270 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.15■□□□□ 0.66
VPS11Q9H270 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS11Q9H270 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.15■□□□□ 0.66
VPS11Q9H270 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.15■□□□□ 0.66
VPS11Q9H270 YBX1P10-201ENST00000444752 975 ntBASIC19.15■□□□□ 0.66
VPS11Q9H270 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS11Q9H270 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
VPS11Q9H270 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS11Q9H270 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.15■□□□□ 0.66
VPS11Q9H270 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS11Q9H270 IRX1P1-201ENST00000438849 1838 ntBASIC19.15■□□□□ 0.66
VPS11Q9H270 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
VPS11Q9H270 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS11Q9H270 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.15■□□□□ 0.66
VPS11Q9H270 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS11Q9H270 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.66
VPS11Q9H270 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
VPS11Q9H270 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.14■□□□□ 0.66
VPS11Q9H270 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS11Q9H270 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.14■□□□□ 0.65
VPS11Q9H270 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.14■□□□□ 0.65
VPS11Q9H270 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
VPS11Q9H270 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS11Q9H270 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VPS11Q9H270 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.14■□□□□ 0.65
VPS11Q9H270 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
VPS11Q9H270 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
VPS11Q9H270 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS11Q9H270 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS11Q9H270 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS11Q9H270 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VPS11Q9H270 SLC29A4P1-201ENST00000398760 971 ntBASIC19.14■□□□□ 0.65
VPS11Q9H270 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.14■□□□□ 0.65
VPS11Q9H270 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
VPS11Q9H270 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.14■□□□□ 0.65
VPS11Q9H270 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.14■□□□□ 0.65
VPS11Q9H270 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.14■□□□□ 0.65
VPS11Q9H270 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VPS11Q9H270 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
VPS11Q9H270 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
VPS11Q9H270 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.14■□□□□ 0.65
VPS11Q9H270 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.14■□□□□ 0.65
VPS11Q9H270 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.14■□□□□ 0.65
VPS11Q9H270 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.14■□□□□ 0.65
VPS11Q9H270 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.14■□□□□ 0.65
VPS11Q9H270 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.14■□□□□ 0.65
VPS11Q9H270 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
VPS11Q9H270 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS11Q9H270 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS11Q9H270 PCDHB18P-201ENST00000524813 2368 ntBASIC19.14■□□□□ 0.65
VPS11Q9H270 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.14■□□□□ 0.65
VPS11Q9H270 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS11Q9H270 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
VPS11Q9H270 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS11Q9H270 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS11Q9H270 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS11Q9H270 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
VPS11Q9H270 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VPS11Q9H270 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VPS11Q9H270 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS11Q9H270 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.13■□□□□ 0.65
VPS11Q9H270 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS11Q9H270 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.13■□□□□ 0.65
VPS11Q9H270 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
VPS11Q9H270 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS11Q9H270 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
VPS11Q9H270 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
VPS11Q9H270 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VPS11Q9H270 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VPS11Q9H270 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VPS11Q9H270 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.13■□□□□ 0.65
VPS11Q9H270 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.13■□□□□ 0.65
VPS11Q9H270 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.13■□□□□ 0.65
VPS11Q9H270 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.13■□□□□ 0.65
VPS11Q9H270 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.13■□□□□ 0.65
VPS11Q9H270 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS11Q9H270 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS11Q9H270 HTR7P1-202ENST00000624664 4411 ntBASIC19.13■□□□□ 0.65
VPS11Q9H270 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
VPS11Q9H270 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.13■□□□□ 0.65
VPS11Q9H270 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.13■□□□□ 0.65
VPS11Q9H270 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VPS11Q9H270 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS11Q9H270 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.13■□□□□ 0.65
VPS11Q9H270 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS11Q9H270 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VPS11Q9H270 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS11Q9H270 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VPS11Q9H270 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS11Q9H270 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS11Q9H270 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.13■□□□□ 0.65
VPS11Q9H270 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VPS11Q9H270 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS11Q9H270 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VPS11Q9H270 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
VPS11Q9H270 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
VPS11Q9H270 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms