Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.02■□□□□ 0.16
FOXC2Q99958 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXC2Q99958 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXC2Q99958 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FOXC2Q99958 LINC00265-3P-201ENST00000447588 903 ntBASIC16.02■□□□□ 0.16
FOXC2Q99958 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXC2Q99958 FOSL1P1-201ENST00000511041 816 ntBASIC16.02■□□□□ 0.16
FOXC2Q99958 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.02■□□□□ 0.16
FOXC2Q99958 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.02■□□□□ 0.16
FOXC2Q99958 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.02■□□□□ 0.16
FOXC2Q99958 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.02■□□□□ 0.16
FOXC2Q99958 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.02■□□□□ 0.16
FOXC2Q99958 AL671883.3-201ENST00000603274 991 ntBASIC16.02■□□□□ 0.16
FOXC2Q99958 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
FOXC2Q99958 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.02■□□□□ 0.16
FOXC2Q99958 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.02■□□□□ 0.16
FOXC2Q99958 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.02■□□□□ 0.16
FOXC2Q99958 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.02■□□□□ 0.15
FOXC2Q99958 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
FOXC2Q99958 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
FOXC2Q99958 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
FOXC2Q99958 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FOXC2Q99958 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
FOXC2Q99958 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FOXC2Q99958 LINC01465-201ENST00000408887 1940 ntBASIC16.02■□□□□ 0.15
FOXC2Q99958 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.02■□□□□ 0.15
FOXC2Q99958 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXC2Q99958 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXC2Q99958 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXC2Q99958 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
FOXC2Q99958 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXC2Q99958 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXC2Q99958 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.01■□□□□ 0.15
FOXC2Q99958 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXC2Q99958 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXC2Q99958 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXC2Q99958 TSPY22P-201ENST00000427496 604 ntBASIC16.01■□□□□ 0.15
FOXC2Q99958 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.01■□□□□ 0.15
FOXC2Q99958 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.01■□□□□ 0.15
FOXC2Q99958 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.01■□□□□ 0.15
FOXC2Q99958 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.01■□□□□ 0.15
FOXC2Q99958 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXC2Q99958 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.01■□□□□ 0.15
FOXC2Q99958 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXC2Q99958 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXC2Q99958 FP700111.2-201ENST00000619190 1892 ntBASIC16.01■□□□□ 0.15
FOXC2Q99958 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.01■□□□□ 0.15
FOXC2Q99958 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXC2Q99958 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
FOXC2Q99958 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16■□□□□ 0.15
FOXC2Q99958 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
FOXC2Q99958 HLA-A-201ENST00000376802 1334 ntBASIC16■□□□□ 0.15
FOXC2Q99958 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXC2Q99958 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
FOXC2Q99958 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
FOXC2Q99958 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXC2Q99958 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXC2Q99958 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16■□□□□ 0.15
FOXC2Q99958 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16■□□□□ 0.15
FOXC2Q99958 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
FOXC2Q99958 MRPL3P1-201ENST00000400109 1033 ntBASIC16■□□□□ 0.15
FOXC2Q99958 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
FOXC2Q99958 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
FOXC2Q99958 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
FOXC2Q99958 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16■□□□□ 0.15
FOXC2Q99958 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
FOXC2Q99958 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16■□□□□ 0.15
FOXC2Q99958 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
FOXC2Q99958 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXC2Q99958 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXC2Q99958 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXC2Q99958 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXC2Q99958 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
FOXC2Q99958 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16■□□□□ 0.15
FOXC2Q99958 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
FOXC2Q99958 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXC2Q99958 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
FOXC2Q99958 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
FOXC2Q99958 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXC2Q99958 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
FOXC2Q99958 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.99■□□□□ 0.15
FOXC2Q99958 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
FOXC2Q99958 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.99■□□□□ 0.15
FOXC2Q99958 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXC2Q99958 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.99■□□□□ 0.15
FOXC2Q99958 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
FOXC2Q99958 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
FOXC2Q99958 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXC2Q99958 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXC2Q99958 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.99■□□□□ 0.15
FOXC2Q99958 AL590627.1-203ENST00000421194 1026 ntBASIC15.99■□□□□ 0.15
FOXC2Q99958 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.99■□□□□ 0.15
FOXC2Q99958 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXC2Q99958 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXC2Q99958 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.99■□□□□ 0.15
FOXC2Q99958 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXC2Q99958 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXC2Q99958 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
FOXC2Q99958 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXC2Q99958 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms