Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.68■□□□□ 0.74
NUDCD1Q96RS6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD1Q96RS6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD1Q96RS6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD1Q96RS6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD1Q96RS6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD1Q96RS6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD1Q96RS6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD1Q96RS6 NIFKP9-201ENST00000419265 221 ntBASIC19.68■□□□□ 0.74
NUDCD1Q96RS6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.68■□□□□ 0.74
NUDCD1Q96RS6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD1Q96RS6 AP002982.1-201ENST00000492365 877 ntBASIC19.68■□□□□ 0.74
NUDCD1Q96RS6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.68■□□□□ 0.74
NUDCD1Q96RS6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.68■□□□□ 0.74
NUDCD1Q96RS6 AF186192.3-201ENST00000583427 947 ntBASIC19.68■□□□□ 0.74
NUDCD1Q96RS6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD1Q96RS6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD1Q96RS6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.68■□□□□ 0.74
NUDCD1Q96RS6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD1Q96RS6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD1Q96RS6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUDCD1Q96RS6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 RPS2P55-201ENST00000397318 883 ntBASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 AC012618.2-201ENST00000428058 849 ntBASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 AC107956.1-201ENST00000494359 873 ntBASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 AC008550.1-201ENST00000511500 884 ntBASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 HLA-A-209ENST00000638375 975 ntBASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.67■□□□□ 0.74
NUDCD1Q96RS6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 AC233702.5-201ENST00000584107 538 ntBASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 AC005332.8-201ENST00000622750 2735 ntBASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.66■□□□□ 0.74
NUDCD1Q96RS6 AC020763.4-201ENST00000623414 4170 ntBASIC19.65■□□□□ 0.74
NUDCD1Q96RS6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NUDCD1Q96RS6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUDCD1Q96RS6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NUDCD1Q96RS6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUDCD1Q96RS6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.65■□□□□ 0.74
NUDCD1Q96RS6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUDCD1Q96RS6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.65■□□□□ 0.74
NUDCD1Q96RS6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.65■□□□□ 0.74
NUDCD1Q96RS6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.65■□□□□ 0.74
NUDCD1Q96RS6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NUDCD1Q96RS6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUDCD1Q96RS6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUDCD1Q96RS6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUDCD1Q96RS6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.65■□□□□ 0.74
NUDCD1Q96RS6 KSR1P1-201ENST00000446298 240 ntBASIC19.65■□□□□ 0.74
NUDCD1Q96RS6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NUDCD1Q96RS6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NUDCD1Q96RS6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms