Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC22.54■■□□□ 1.2
NEK1Q96PY6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NEK1Q96PY6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.54■■□□□ 1.2
NEK1Q96PY6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.54■■□□□ 1.2
NEK1Q96PY6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NEK1Q96PY6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC22.54■■□□□ 1.2
NEK1Q96PY6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NEK1Q96PY6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
NEK1Q96PY6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NEK1Q96PY6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NEK1Q96PY6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
NEK1Q96PY6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NEK1Q96PY6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
NEK1Q96PY6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
NEK1Q96PY6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NEK1Q96PY6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC22.53■■□□□ 1.2
NEK1Q96PY6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
NEK1Q96PY6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NEK1Q96PY6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.53■■□□□ 1.2
NEK1Q96PY6 AC012618.2-201ENST00000428058 849 ntBASIC22.53■■□□□ 1.2
NEK1Q96PY6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC22.53■■□□□ 1.2
NEK1Q96PY6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NEK1Q96PY6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.53■■□□□ 1.2
NEK1Q96PY6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
NEK1Q96PY6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.53■■□□□ 1.2
NEK1Q96PY6 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.53■■□□□ 1.2
NEK1Q96PY6 Z99916.2-201ENST00000604037 246 ntBASIC22.53■■□□□ 1.2
NEK1Q96PY6 AC113410.3-201ENST00000623366 203 ntBASIC22.53■■□□□ 1.2
NEK1Q96PY6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC22.53■■□□□ 1.2
NEK1Q96PY6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
NEK1Q96PY6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NEK1Q96PY6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NEK1Q96PY6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.52■■□□□ 1.2
NEK1Q96PY6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NEK1Q96PY6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC22.52■■□□□ 1.2
NEK1Q96PY6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NEK1Q96PY6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
NEK1Q96PY6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
NEK1Q96PY6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NEK1Q96PY6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
NEK1Q96PY6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NEK1Q96PY6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
NEK1Q96PY6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NEK1Q96PY6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NEK1Q96PY6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NEK1Q96PY6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
NEK1Q96PY6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NEK1Q96PY6 PRSS44-201ENST00000515154 1146 ntBASIC22.52■■□□□ 1.2
NEK1Q96PY6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NEK1Q96PY6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
NEK1Q96PY6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NEK1Q96PY6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.52■■□□□ 1.2
NEK1Q96PY6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NEK1Q96PY6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NEK1Q96PY6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NEK1Q96PY6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NEK1Q96PY6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC22.52■■□□□ 1.2
NEK1Q96PY6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NEK1Q96PY6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
NEK1Q96PY6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
NEK1Q96PY6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NEK1Q96PY6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NEK1Q96PY6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NEK1Q96PY6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NEK1Q96PY6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NEK1Q96PY6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NEK1Q96PY6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NEK1Q96PY6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
NEK1Q96PY6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC22.51■■□□□ 1.19
NEK1Q96PY6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NEK1Q96PY6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC22.51■■□□□ 1.19
NEK1Q96PY6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC22.51■■□□□ 1.19
NEK1Q96PY6 AL049637.2-201ENST00000641778 930 ntBASIC22.51■■□□□ 1.19
NEK1Q96PY6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
NEK1Q96PY6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
NEK1Q96PY6 FSCN1P1-201ENST00000568912 1481 ntBASIC22.51■■□□□ 1.19
NEK1Q96PY6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
NEK1Q96PY6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NEK1Q96PY6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NEK1Q96PY6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC22.51■■□□□ 1.19
NEK1Q96PY6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC22.5■■□□□ 1.19
NEK1Q96PY6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
NEK1Q96PY6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
NEK1Q96PY6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
NEK1Q96PY6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.5■■□□□ 1.19
NEK1Q96PY6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NEK1Q96PY6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
NEK1Q96PY6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NEK1Q96PY6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NEK1Q96PY6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.5■■□□□ 1.19
NEK1Q96PY6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
NEK1Q96PY6 FAM207BP-201ENST00000447172 505 ntBASIC22.5■■□□□ 1.19
NEK1Q96PY6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC22.5■■□□□ 1.19
NEK1Q96PY6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.5■■□□□ 1.19
NEK1Q96PY6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC22.5■■□□□ 1.19
NEK1Q96PY6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC22.5■■□□□ 1.19
NEK1Q96PY6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC22.5■■□□□ 1.19
NEK1Q96PY6 AP001412.1-201ENST00000608405 714 ntBASIC22.5■■□□□ 1.19
NEK1Q96PY6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NEK1Q96PY6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms