Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 AP005242.2-201ENST00000580065 1175 ntBASIC15.85■□□□□ 0.13
GAFA1Q96PS6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.84■□□□□ 0.13
GAFA1Q96PS6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.84■□□□□ 0.13
GAFA1Q96PS6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
GAFA1Q96PS6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GAFA1Q96PS6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
GAFA1Q96PS6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GAFA1Q96PS6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
GAFA1Q96PS6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
GAFA1Q96PS6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GAFA1Q96PS6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
GAFA1Q96PS6 AL390955.1-201ENST00000428694 934 ntBASIC15.84■□□□□ 0.13
GAFA1Q96PS6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GAFA1Q96PS6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
GAFA1Q96PS6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.84■□□□□ 0.13
GAFA1Q96PS6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GAFA1Q96PS6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GAFA1Q96PS6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GAFA1Q96PS6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
GAFA1Q96PS6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GAFA1Q96PS6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GAFA1Q96PS6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.84■□□□□ 0.13
GAFA1Q96PS6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GAFA1Q96PS6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.84■□□□□ 0.13
GAFA1Q96PS6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.84■□□□□ 0.13
GAFA1Q96PS6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
GAFA1Q96PS6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
GAFA1Q96PS6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
GAFA1Q96PS6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.83■□□□□ 0.13
GAFA1Q96PS6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
GAFA1Q96PS6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
GAFA1Q96PS6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GAFA1Q96PS6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GAFA1Q96PS6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GAFA1Q96PS6 MIR1238-201ENST00000408483 83 ntBASIC15.83■□□□□ 0.12
GAFA1Q96PS6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GAFA1Q96PS6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GAFA1Q96PS6 FITM1-202ENST00000559294 800 ntBASIC15.83■□□□□ 0.12
GAFA1Q96PS6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.83■□□□□ 0.12
GAFA1Q96PS6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GAFA1Q96PS6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GAFA1Q96PS6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
GAFA1Q96PS6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GAFA1Q96PS6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
GAFA1Q96PS6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GAFA1Q96PS6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
GAFA1Q96PS6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.83■□□□□ 0.12
GAFA1Q96PS6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.83■□□□□ 0.12
GAFA1Q96PS6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.83■□□□□ 0.12
GAFA1Q96PS6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.83■□□□□ 0.12
GAFA1Q96PS6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
GAFA1Q96PS6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms