Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.03■□□□□ -0
NPIPB3Q92617 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.03■□□□□ -0
NPIPB3Q92617 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
NPIPB3Q92617 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.03■□□□□ -0
NPIPB3Q92617 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB3Q92617 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB3Q92617 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.03■□□□□ -0
NPIPB3Q92617 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.03■□□□□ -0
NPIPB3Q92617 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB3Q92617 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.03■□□□□ -0
NPIPB3Q92617 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB3Q92617 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NPIPB3Q92617 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.03■□□□□ -0
NPIPB3Q92617 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NPIPB3Q92617 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB3Q92617 GUSBP6-202ENST00000438529 1198 ntBASIC15.03■□□□□ -0
NPIPB3Q92617 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.03■□□□□ -0
NPIPB3Q92617 AC060766.5-201ENST00000590539 871 ntBASIC15.03■□□□□ -0
NPIPB3Q92617 PFKL-212ENST00000628044 129 ntTSL 3 BASIC15.03■□□□□ -0
NPIPB3Q92617 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB3Q92617 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB3Q92617 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
NPIPB3Q92617 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB3Q92617 FEM1AP3-201ENST00000403722 1741 ntBASIC15.03■□□□□ -0
NPIPB3Q92617 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB3Q92617 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
NPIPB3Q92617 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.03■□□□□ -0
NPIPB3Q92617 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB3Q92617 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.03■□□□□ -0
NPIPB3Q92617 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPB3Q92617 AC093525.10-201ENST00000625130 1569 ntBASIC15.02■□□□□ -0
NPIPB3Q92617 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
NPIPB3Q92617 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
NPIPB3Q92617 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPIPB3Q92617 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPB3Q92617 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.02■□□□□ -0
NPIPB3Q92617 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPB3Q92617 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPB3Q92617 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPB3Q92617 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.02■□□□□ -0
NPIPB3Q92617 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPIPB3Q92617 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPB3Q92617 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPB3Q92617 NCF1B-203ENST00000435988 1254 ntBASIC15.02■□□□□ -0
NPIPB3Q92617 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.02■□□□□ -0
NPIPB3Q92617 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.02■□□□□ -0
NPIPB3Q92617 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.02■□□□□ -0
NPIPB3Q92617 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.02■□□□□ -0
NPIPB3Q92617 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.02■□□□□ -0
NPIPB3Q92617 AL121829.2-201ENST00000620908 328 ntBASIC15.02■□□□□ -0
NPIPB3Q92617 MYC-209ENST00000641252 345 ntBASIC15.02■□□□□ -0
NPIPB3Q92617 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.02□□□□□ -0.01
NPIPB3Q92617 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPB3Q92617 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPB3Q92617 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPB3Q92617 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
NPIPB3Q92617 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPB3Q92617 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
NPIPB3Q92617 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
NPIPB3Q92617 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
NPIPB3Q92617 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPB3Q92617 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPB3Q92617 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.02□□□□□ -0.01
NPIPB3Q92617 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPB3Q92617 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
NPIPB3Q92617 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPB3Q92617 AL512353.2-201ENST00000448759 1962 ntBASIC15.02□□□□□ -0.01
NPIPB3Q92617 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NPIPB3Q92617 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB3Q92617 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB3Q92617 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB3Q92617 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB3Q92617 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB3Q92617 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB3Q92617 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB3Q92617 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
NPIPB3Q92617 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB3Q92617 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB3Q92617 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB3Q92617 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
NPIPB3Q92617 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB3Q92617 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
NPIPB3Q92617 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.01□□□□□ -0.01
NPIPB3Q92617 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPB3Q92617 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.01□□□□□ -0.01
NPIPB3Q92617 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.01□□□□□ -0.01
NPIPB3Q92617 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPB3Q92617 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.01□□□□□ -0.01
NPIPB3Q92617 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.01□□□□□ -0.01
NPIPB3Q92617 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.01□□□□□ -0.01
NPIPB3Q92617 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB3Q92617 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB3Q92617 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB3Q92617 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
NPIPB3Q92617 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB3Q92617 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.01□□□□□ -0.01
NPIPB3Q92617 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB3Q92617 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NPIPB3Q92617 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPB3Q92617 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms