Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.76■□□□□ 0.75
SH3RF2Q8TEC5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SH3RF2Q8TEC5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
SH3RF2Q8TEC5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.75■□□□□ 0.75
SH3RF2Q8TEC5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3RF2Q8TEC5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.75■□□□□ 0.75
SH3RF2Q8TEC5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.75■□□□□ 0.75
SH3RF2Q8TEC5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.75■□□□□ 0.75
SH3RF2Q8TEC5 AL441883.1-201ENST00000566170 1045 ntBASIC19.75■□□□□ 0.75
SH3RF2Q8TEC5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.75■□□□□ 0.75
SH3RF2Q8TEC5 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SH3RF2Q8TEC5 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SH3RF2Q8TEC5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SH3RF2Q8TEC5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3RF2Q8TEC5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3RF2Q8TEC5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SH3RF2Q8TEC5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SH3RF2Q8TEC5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3RF2Q8TEC5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SH3RF2Q8TEC5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH3RF2Q8TEC5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.74■□□□□ 0.75
SH3RF2Q8TEC5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.74■□□□□ 0.75
SH3RF2Q8TEC5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.74■□□□□ 0.75
SH3RF2Q8TEC5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH3RF2Q8TEC5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH3RF2Q8TEC5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.74■□□□□ 0.75
SH3RF2Q8TEC5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH3RF2Q8TEC5 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.74■□□□□ 0.75
SH3RF2Q8TEC5 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH3RF2Q8TEC5 TSPY21P-201ENST00000433481 731 ntBASIC19.74■□□□□ 0.75
SH3RF2Q8TEC5 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH3RF2Q8TEC5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.74■□□□□ 0.75
SH3RF2Q8TEC5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH3RF2Q8TEC5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SH3RF2Q8TEC5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.74■□□□□ 0.75
SH3RF2Q8TEC5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SH3RF2Q8TEC5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.74■□□□□ 0.75
SH3RF2Q8TEC5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH3RF2Q8TEC5 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SH3RF2Q8TEC5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SH3RF2Q8TEC5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SH3RF2Q8TEC5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 AL031133.1-201ENST00000406807 723 ntBASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SH3RF2Q8TEC5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 AC009947.2-201ENST00000444014 672 ntBASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 HOMER2P1-201ENST00000455653 964 ntBASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.72■□□□□ 0.75
SH3RF2Q8TEC5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms