Protein–RNA interactions for Protein: Q8TDG2

ACTRT1, Actin-related protein T1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTRT1Q8TDG2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACTRT1Q8TDG2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ACTRT1Q8TDG2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.85■□□□□ 0.77
ACTRT1Q8TDG2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACTRT1Q8TDG2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.85■□□□□ 0.77
ACTRT1Q8TDG2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.85■□□□□ 0.77
ACTRT1Q8TDG2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ACTRT1Q8TDG2 CDCA4P2-201ENST00000441182 718 ntBASIC19.85■□□□□ 0.77
ACTRT1Q8TDG2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.85■□□□□ 0.77
ACTRT1Q8TDG2 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.85■□□□□ 0.77
ACTRT1Q8TDG2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.85■□□□□ 0.77
ACTRT1Q8TDG2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.85■□□□□ 0.77
ACTRT1Q8TDG2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ACTRT1Q8TDG2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACTRT1Q8TDG2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACTRT1Q8TDG2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.85■□□□□ 0.77
ACTRT1Q8TDG2 AC126763.1-201ENST00000552015 2118 ntBASIC19.85■□□□□ 0.77
ACTRT1Q8TDG2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.85■□□□□ 0.77
ACTRT1Q8TDG2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 HLA-B-256ENST00000639848 1089 ntBASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACTRT1Q8TDG2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
ACTRT1Q8TDG2 AC092368.3-202ENST00000574180 1591 ntBASIC19.83■□□□□ 0.77
ACTRT1Q8TDG2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
ACTRT1Q8TDG2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ACTRT1Q8TDG2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ACTRT1Q8TDG2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ACTRT1Q8TDG2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ACTRT1Q8TDG2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.83■□□□□ 0.77
ACTRT1Q8TDG2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ACTRT1Q8TDG2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ACTRT1Q8TDG2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.83■□□□□ 0.77
ACTRT1Q8TDG2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.83■□□□□ 0.77
ACTRT1Q8TDG2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.83■□□□□ 0.77
ACTRT1Q8TDG2 AC120498.8-201ENST00000614275 531 ntBASIC19.83■□□□□ 0.77
ACTRT1Q8TDG2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ACTRT1Q8TDG2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ACTRT1Q8TDG2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ACTRT1Q8TDG2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.83■□□□□ 0.76
ACTRT1Q8TDG2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ACTRT1Q8TDG2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ACTRT1Q8TDG2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
ACTRT1Q8TDG2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.76
ACTRT1Q8TDG2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ACTRT1Q8TDG2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 MIR663A-201ENST00000385250 93 ntBASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ACTRT1Q8TDG2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms