Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 AC092118.2-201ENST00000613495 667 ntBASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RPS4Y2Q8TD47 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 AL355802.2-201ENST00000402069 882 ntBASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 MIPEPP3-201ENST00000412105 444 ntBASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 AC091874.3-201ENST00000512672 1195 ntBASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 AL121829.2-201ENST00000620908 328 ntBASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 PCDHB18P-201ENST00000524813 2368 ntBASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RPS4Y2Q8TD47 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 TSPY6P-201ENST00000448518 926 ntBASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.65■□□□□ 0.26
RPS4Y2Q8TD47 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms