Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLHC1Q8NHS4 PRKY-204ENST00000533551 1019 ntBASIC18.28■□□□□ 0.52
CLHC1Q8NHS4 AC233263.1-201ENST00000578059 224 ntBASIC18.28■□□□□ 0.52
CLHC1Q8NHS4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLHC1Q8NHS4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLHC1Q8NHS4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLHC1Q8NHS4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLHC1Q8NHS4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.28■□□□□ 0.52
CLHC1Q8NHS4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLHC1Q8NHS4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLHC1Q8NHS4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLHC1Q8NHS4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.28■□□□□ 0.52
CLHC1Q8NHS4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLHC1Q8NHS4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLHC1Q8NHS4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLHC1Q8NHS4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
CLHC1Q8NHS4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLHC1Q8NHS4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 NBPF21P-201ENST00000425093 1451 ntBASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 AC009113.1-201ENST00000570267 2443 ntBASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLHC1Q8NHS4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.27■□□□□ 0.51
CLHC1Q8NHS4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.27■□□□□ 0.51
CLHC1Q8NHS4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.27■□□□□ 0.51
CLHC1Q8NHS4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLHC1Q8NHS4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLHC1Q8NHS4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.26■□□□□ 0.51
CLHC1Q8NHS4 WIZP1-201ENST00000531444 2299 ntBASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLHC1Q8NHS4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms