Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AC010203.1-204ENST00000548782 407 ntBASIC20.48■□□□□ 0.87
BEST2Q8NFU1 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BEST2Q8NFU1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BEST2Q8NFU1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.47■□□□□ 0.87
BEST2Q8NFU1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
BEST2Q8NFU1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BEST2Q8NFU1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.47■□□□□ 0.87
BEST2Q8NFU1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BEST2Q8NFU1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BEST2Q8NFU1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BEST2Q8NFU1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
BEST2Q8NFU1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
BEST2Q8NFU1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.47■□□□□ 0.87
BEST2Q8NFU1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BEST2Q8NFU1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BEST2Q8NFU1 KRT18P57-201ENST00000443599 1254 ntBASIC20.47■□□□□ 0.87
BEST2Q8NFU1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.47■□□□□ 0.87
BEST2Q8NFU1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BEST2Q8NFU1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.47■□□□□ 0.87
BEST2Q8NFU1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
BEST2Q8NFU1 AC141586.3-201ENST00000562166 1838 ntBASIC20.47■□□□□ 0.87
BEST2Q8NFU1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BEST2Q8NFU1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
BEST2Q8NFU1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
BEST2Q8NFU1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 AL032819.2-201ENST00000624543 2162 ntBASIC20.46■□□□□ 0.87
BEST2Q8NFU1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BEST2Q8NFU1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BEST2Q8NFU1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BEST2Q8NFU1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.45■□□□□ 0.86
BEST2Q8NFU1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
BEST2Q8NFU1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.45■□□□□ 0.86
BEST2Q8NFU1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
BEST2Q8NFU1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.45■□□□□ 0.86
BEST2Q8NFU1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
BEST2Q8NFU1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.45■□□□□ 0.86
BEST2Q8NFU1 AL512604.3-201ENST00000569583 964 ntBASIC20.45■□□□□ 0.86
BEST2Q8NFU1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
BEST2Q8NFU1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.45■□□□□ 0.86
BEST2Q8NFU1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.45■□□□□ 0.86
BEST2Q8NFU1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.45■□□□□ 0.86
BEST2Q8NFU1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BEST2Q8NFU1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BEST2Q8NFU1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BEST2Q8NFU1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
BEST2Q8NFU1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.44■□□□□ 0.86
BEST2Q8NFU1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
BEST2Q8NFU1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
BEST2Q8NFU1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.44■□□□□ 0.86
BEST2Q8NFU1 AC007952.6-201ENST00000573168 2673 ntBASIC20.44■□□□□ 0.86
BEST2Q8NFU1 AC003957.1-201ENST00000625108 2673 ntBASIC20.44■□□□□ 0.86
BEST2Q8NFU1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.44■□□□□ 0.86
BEST2Q8NFU1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
BEST2Q8NFU1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.44■□□□□ 0.86
BEST2Q8NFU1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
BEST2Q8NFU1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BEST2Q8NFU1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.44■□□□□ 0.86
BEST2Q8NFU1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.44■□□□□ 0.86
BEST2Q8NFU1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.44■□□□□ 0.86
BEST2Q8NFU1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.44■□□□□ 0.86
BEST2Q8NFU1 AL445228.2-201ENST00000605589 952 ntBASIC20.44■□□□□ 0.86
BEST2Q8NFU1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
BEST2Q8NFU1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BEST2Q8NFU1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
BEST2Q8NFU1 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.44■□□□□ 0.86
BEST2Q8NFU1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
BEST2Q8NFU1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms