Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
SPTSSBQ8NFR3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SPTSSBQ8NFR3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
SPTSSBQ8NFR3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SPTSSBQ8NFR3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
SPTSSBQ8NFR3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
SPTSSBQ8NFR3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SPTSSBQ8NFR3 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SPTSSBQ8NFR3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SPTSSBQ8NFR3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SPTSSBQ8NFR3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
SPTSSBQ8NFR3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
SPTSSBQ8NFR3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SPTSSBQ8NFR3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
SPTSSBQ8NFR3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
SPTSSBQ8NFR3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SPTSSBQ8NFR3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SPTSSBQ8NFR3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 AC027702.1-201ENST00000563810 1770 ntBASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 AC007225.1-201ENST00000566331 1836 ntBASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 NOC2LP2-201ENST00000407594 1944 ntBASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.74
SPTSSBQ8NFR3 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 AP004607.7-201ENST00000527152 1677 ntBASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
SPTSSBQ8NFR3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC10.44□□□□□ -0.74
SPTSSBQ8NFR3 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms