Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 AC142381.4-202ENST00000563973 229 ntBASIC17.82■□□□□ 0.44
NUP43Q8NFH3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 CR392000.1-201ENST00000624770 1228 ntBASIC17.82■□□□□ 0.44
NUP43Q8NFH3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 CROCCP3-202ENST00000420820 1947 ntBASIC17.81■□□□□ 0.44
NUP43Q8NFH3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.81■□□□□ 0.44
NUP43Q8NFH3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NUP43Q8NFH3 KRT16P1-201ENST00000399124 1418 ntBASIC17.81■□□□□ 0.44
NUP43Q8NFH3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 AF186192.3-201ENST00000583427 947 ntBASIC17.8■□□□□ 0.44
NUP43Q8NFH3 AC073195.1-201ENST00000607241 877 ntBASIC17.8■□□□□ 0.44
NUP43Q8NFH3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NUP43Q8NFH3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUP43Q8NFH3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUP43Q8NFH3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUP43Q8NFH3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.79■□□□□ 0.44
NUP43Q8NFH3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUP43Q8NFH3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NUP43Q8NFH3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NUP43Q8NFH3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.79■□□□□ 0.44
NUP43Q8NFH3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.79■□□□□ 0.44
NUP43Q8NFH3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.79■□□□□ 0.44
NUP43Q8NFH3 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.79■□□□□ 0.44
NUP43Q8NFH3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NUP43Q8NFH3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUP43Q8NFH3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
NUP43Q8NFH3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.79■□□□□ 0.44
NUP43Q8NFH3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NUP43Q8NFH3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
NUP43Q8NFH3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
NUP43Q8NFH3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms