Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.92■□□□□ 0.62
NUDCD3Q8IVD9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 AC005181.1-201ENST00000604782 1256 ntBASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NUDCD3Q8IVD9 AC124283.5-201ENST00000624661 1809 ntBASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 AP006587.1-201ENST00000534129 1502 ntBASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NUDCD3Q8IVD9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NUDCD3Q8IVD9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.89■□□□□ 0.62
NUDCD3Q8IVD9 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
NUDCD3Q8IVD9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD3Q8IVD9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD3Q8IVD9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD3Q8IVD9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.89■□□□□ 0.61
NUDCD3Q8IVD9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD3Q8IVD9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD3Q8IVD9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
NUDCD3Q8IVD9 YBX1P10-201ENST00000444752 975 ntBASIC18.89■□□□□ 0.61
NUDCD3Q8IVD9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.89■□□□□ 0.61
NUDCD3Q8IVD9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD3Q8IVD9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD3Q8IVD9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
NUDCD3Q8IVD9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD3Q8IVD9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD3Q8IVD9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD3Q8IVD9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD3Q8IVD9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD3Q8IVD9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NUDCD3Q8IVD9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD3Q8IVD9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.89■□□□□ 0.61
NUDCD3Q8IVD9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUDCD3Q8IVD9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.89■□□□□ 0.61
NUDCD3Q8IVD9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NUDCD3Q8IVD9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms