Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB43Q86YS6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RAB43Q86YS6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB43Q86YS6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB43Q86YS6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB43Q86YS6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB43Q86YS6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB43Q86YS6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB43Q86YS6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RAB43Q86YS6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RAB43Q86YS6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
RAB43Q86YS6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB43Q86YS6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB43Q86YS6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RAB43Q86YS6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB43Q86YS6 AC112907.3-201ENST00000577781 2400 ntBASIC18.16■□□□□ 0.5
RAB43Q86YS6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB43Q86YS6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB43Q86YS6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RAB43Q86YS6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.16■□□□□ 0.5
RAB43Q86YS6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB43Q86YS6 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB43Q86YS6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB43Q86YS6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB43Q86YS6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.16■□□□□ 0.5
RAB43Q86YS6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB43Q86YS6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RAB43Q86YS6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB43Q86YS6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB43Q86YS6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
RAB43Q86YS6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB43Q86YS6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB43Q86YS6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB43Q86YS6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
RAB43Q86YS6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB43Q86YS6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
RAB43Q86YS6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB43Q86YS6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB43Q86YS6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB43Q86YS6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB43Q86YS6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB43Q86YS6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB43Q86YS6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB43Q86YS6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB43Q86YS6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB43Q86YS6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RAB43Q86YS6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB43Q86YS6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB43Q86YS6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB43Q86YS6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB43Q86YS6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB43Q86YS6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB43Q86YS6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB43Q86YS6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB43Q86YS6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB43Q86YS6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB43Q86YS6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RAB43Q86YS6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB43Q86YS6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB43Q86YS6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RAB43Q86YS6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB43Q86YS6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
RAB43Q86YS6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB43Q86YS6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB43Q86YS6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB43Q86YS6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
RAB43Q86YS6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB43Q86YS6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB43Q86YS6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB43Q86YS6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RAB43Q86YS6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RAB43Q86YS6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.14■□□□□ 0.5
RAB43Q86YS6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RAB43Q86YS6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RAB43Q86YS6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
RAB43Q86YS6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
RAB43Q86YS6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
RAB43Q86YS6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RAB43Q86YS6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RAB43Q86YS6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
RAB43Q86YS6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB43Q86YS6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB43Q86YS6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.14■□□□□ 0.49
RAB43Q86YS6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAB43Q86YS6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB43Q86YS6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB43Q86YS6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB43Q86YS6 MFAP1P1-201ENST00000442257 1255 ntBASIC18.14■□□□□ 0.49
RAB43Q86YS6 CCR12P-201ENST00000446203 998 ntBASIC18.14■□□□□ 0.49
RAB43Q86YS6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.14■□□□□ 0.49
RAB43Q86YS6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB43Q86YS6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB43Q86YS6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAB43Q86YS6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
RAB43Q86YS6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB43Q86YS6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.14■□□□□ 0.49
RAB43Q86YS6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB43Q86YS6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB43Q86YS6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB43Q86YS6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms