Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM50Q86XT4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM50Q86XT4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM50Q86XT4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM50Q86XT4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TRIM50Q86XT4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TRIM50Q86XT4 TSPY21P-201ENST00000433481 731 ntBASIC21.23■□□□□ 0.99
TRIM50Q86XT4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM50Q86XT4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM50Q86XT4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM50Q86XT4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM50Q86XT4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.23■□□□□ 0.99
TRIM50Q86XT4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM50Q86XT4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.23■□□□□ 0.99
TRIM50Q86XT4 AC140113.3-201ENST00000605663 199 ntBASIC21.23■□□□□ 0.99
TRIM50Q86XT4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM50Q86XT4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM50Q86XT4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM50Q86XT4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM50Q86XT4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM50Q86XT4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM50Q86XT4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM50Q86XT4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
TRIM50Q86XT4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM50Q86XT4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
TRIM50Q86XT4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM50Q86XT4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM50Q86XT4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM50Q86XT4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.21■□□□□ 0.99
TRIM50Q86XT4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM50Q86XT4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM50Q86XT4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM50Q86XT4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM50Q86XT4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM50Q86XT4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM50Q86XT4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.21■□□□□ 0.99
TRIM50Q86XT4 AL031432.5-201ENST00000641059 760 ntBASIC21.21■□□□□ 0.99
TRIM50Q86XT4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
TRIM50Q86XT4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM50Q86XT4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM50Q86XT4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM50Q86XT4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM50Q86XT4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM50Q86XT4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TRIM50Q86XT4 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.2■□□□□ 0.98
TRIM50Q86XT4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM50Q86XT4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM50Q86XT4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM50Q86XT4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM50Q86XT4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM50Q86XT4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM50Q86XT4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms