Protein–RNA interactions for Protein: Q86WT1

TTC30A, Tetratricopeptide repeat protein 30A, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC30AQ86WT1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TTC30AQ86WT1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC30AQ86WT1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC30AQ86WT1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC30AQ86WT1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC30AQ86WT1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC30AQ86WT1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TTC30AQ86WT1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC30AQ86WT1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.2■□□□□ 0.82
TTC30AQ86WT1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC30AQ86WT1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.2■□□□□ 0.82
TTC30AQ86WT1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC30AQ86WT1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC30AQ86WT1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC30AQ86WT1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
TTC30AQ86WT1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TTC30AQ86WT1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC30AQ86WT1 TMPOP1-202ENST00000424642 1267 ntBASIC20.2■□□□□ 0.82
TTC30AQ86WT1 FITM1-202ENST00000559294 800 ntBASIC20.2■□□□□ 0.82
TTC30AQ86WT1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.2■□□□□ 0.82
TTC30AQ86WT1 AC097493.4-201ENST00000641197 219 ntBASIC20.2■□□□□ 0.82
TTC30AQ86WT1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.2■□□□□ 0.82
TTC30AQ86WT1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
TTC30AQ86WT1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TTC30AQ86WT1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC30AQ86WT1 IRX1P1-201ENST00000438849 1838 ntBASIC20.2■□□□□ 0.82
TTC30AQ86WT1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.2■□□□□ 0.82
TTC30AQ86WT1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.2■□□□□ 0.82
TTC30AQ86WT1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC30AQ86WT1 KRT8P9-201ENST00000558927 1449 ntBASIC20.19■□□□□ 0.82
TTC30AQ86WT1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC30AQ86WT1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
TTC30AQ86WT1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
TTC30AQ86WT1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TTC30AQ86WT1 MIR1238-201ENST00000408483 83 ntBASIC20.19■□□□□ 0.82
TTC30AQ86WT1 MFAP1P1-201ENST00000442257 1255 ntBASIC20.19■□□□□ 0.82
TTC30AQ86WT1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.19■□□□□ 0.82
TTC30AQ86WT1 PRSS44-201ENST00000515154 1146 ntBASIC20.19■□□□□ 0.82
TTC30AQ86WT1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.19■□□□□ 0.82
TTC30AQ86WT1 RN7SL850P-201ENST00000579959 291 ntBASIC20.19■□□□□ 0.82
TTC30AQ86WT1 AP005242.2-201ENST00000580065 1175 ntBASIC20.19■□□□□ 0.82
TTC30AQ86WT1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.19■□□□□ 0.82
TTC30AQ86WT1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TTC30AQ86WT1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC30AQ86WT1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC30AQ86WT1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC30AQ86WT1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC30AQ86WT1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.19■□□□□ 0.82
TTC30AQ86WT1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.19■□□□□ 0.82
TTC30AQ86WT1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
TTC30AQ86WT1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
TTC30AQ86WT1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
TTC30AQ86WT1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC30AQ86WT1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TTC30AQ86WT1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
TTC30AQ86WT1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC30AQ86WT1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC30AQ86WT1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC30AQ86WT1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.18■□□□□ 0.82
TTC30AQ86WT1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC30AQ86WT1 CRYGFP-201ENST00000418459 633 ntBASIC20.18■□□□□ 0.82
TTC30AQ86WT1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.18■□□□□ 0.82
TTC30AQ86WT1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.18■□□□□ 0.82
TTC30AQ86WT1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC30AQ86WT1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.18■□□□□ 0.82
TTC30AQ86WT1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC30AQ86WT1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TTC30AQ86WT1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TTC30AQ86WT1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.18■□□□□ 0.82
TTC30AQ86WT1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC30AQ86WT1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TTC30AQ86WT1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TTC30AQ86WT1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC30AQ86WT1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TTC30AQ86WT1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC30AQ86WT1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.17■□□□□ 0.82
TTC30AQ86WT1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.17■□□□□ 0.82
TTC30AQ86WT1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC30AQ86WT1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.17■□□□□ 0.82
TTC30AQ86WT1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.17■□□□□ 0.82
TTC30AQ86WT1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.17■□□□□ 0.82
TTC30AQ86WT1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
TTC30AQ86WT1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TTC30AQ86WT1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TTC30AQ86WT1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC30AQ86WT1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TTC30AQ86WT1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.17■□□□□ 0.82
TTC30AQ86WT1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.17■□□□□ 0.82
TTC30AQ86WT1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC30AQ86WT1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC30AQ86WT1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC30AQ86WT1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC30AQ86WT1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC30AQ86WT1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC30AQ86WT1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC30AQ86WT1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.16■□□□□ 0.82
TTC30AQ86WT1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.16■□□□□ 0.82
TTC30AQ86WT1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
TTC30AQ86WT1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC30AQ86WT1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms