Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 AC096733.2-201ENST00000609937 1394 ntBASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 KRT8P3-201ENST00000519669 1449 ntBASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COLCA1Q6ZS62 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 MIR718-201ENST00000390190 70 ntBASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COLCA1Q6ZS62 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 REXO1L10P-201ENST00000615707 1290 ntBASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 REXO1L12P-201ENST00000622156 912 ntBASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 AP006294.2-201ENST00000641667 209 ntBASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 AC004408.2-201ENST00000623613 2777 ntBASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 AL031598.1-201ENST00000561511 1773 ntBASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.38■□□□□ 0.21
COLCA1Q6ZS62 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms