Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 GUSBP6-202ENST00000438529 1198 ntBASIC17.99■□□□□ 0.47
RUNDC3AQ59EK9 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.99■□□□□ 0.47
RUNDC3AQ59EK9 AC097658.1-201ENST00000475555 843 ntBASIC17.99■□□□□ 0.47
RUNDC3AQ59EK9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.99■□□□□ 0.47
RUNDC3AQ59EK9 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.99■□□□□ 0.47
RUNDC3AQ59EK9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.99■□□□□ 0.47
RUNDC3AQ59EK9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RUNDC3AQ59EK9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RUNDC3AQ59EK9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RUNDC3AQ59EK9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RUNDC3AQ59EK9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RUNDC3AQ59EK9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RUNDC3AQ59EK9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RUNDC3AQ59EK9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RUNDC3AQ59EK9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RUNDC3AQ59EK9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.99■□□□□ 0.47
RUNDC3AQ59EK9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RUNDC3AQ59EK9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RUNDC3AQ59EK9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RUNDC3AQ59EK9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 AC060766.5-201ENST00000590539 871 ntBASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 AL137784.2-201ENST00000607332 1000 ntBASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 NOC2LP1-202ENST00000452600 2235 ntBASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.98■□□□□ 0.47
RUNDC3AQ59EK9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 MIR4758-201ENST00000577688 71 ntBASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RUNDC3AQ59EK9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 SLC29A4P1-201ENST00000398760 971 ntBASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 TSPY21P-201ENST00000433481 731 ntBASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RUNDC3AQ59EK9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms