Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RASGEF1BQ0VAM2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 AL445675.2-201ENST00000620291 557 ntBASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 HLA-A-209ENST00000638375 975 ntBASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RASGEF1BQ0VAM2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 LINC01465-201ENST00000408887 1940 ntBASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 SNORA78-201ENST00000459373 127 ntBASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 AC131212.4-201ENST00000623606 975 ntBASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.29■□□□□ 0.36
RASGEF1BQ0VAM2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RASGEF1BQ0VAM2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms