Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CDKL1Q00532 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL1Q00532 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL1Q00532 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDKL1Q00532 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.73■□□□□ 0.59
CDKL1Q00532 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL1Q00532 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL1Q00532 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL1Q00532 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL1Q00532 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL1Q00532 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.72■□□□□ 0.59
CDKL1Q00532 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.72■□□□□ 0.59
CDKL1Q00532 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
CDKL1Q00532 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL1Q00532 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CDKL1Q00532 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL1Q00532 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL1Q00532 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL1Q00532 TSPY21P-201ENST00000433481 731 ntBASIC18.72■□□□□ 0.59
CDKL1Q00532 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CDKL1Q00532 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.72■□□□□ 0.59
CDKL1Q00532 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL1Q00532 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
CDKL1Q00532 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.72■□□□□ 0.59
CDKL1Q00532 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL1Q00532 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL1Q00532 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL1Q00532 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDKL1Q00532 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.72■□□□□ 0.59
CDKL1Q00532 FP475955.4-201ENST00000623131 1990 ntBASIC18.72■□□□□ 0.59
CDKL1Q00532 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
CDKL1Q00532 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL1Q00532 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.71■□□□□ 0.59
CDKL1Q00532 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.71■□□□□ 0.59
CDKL1Q00532 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.71■□□□□ 0.59
CDKL1Q00532 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CDKL1Q00532 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL1Q00532 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.71■□□□□ 0.59
CDKL1Q00532 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL1Q00532 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL1Q00532 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
CDKL1Q00532 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.71■□□□□ 0.59
CDKL1Q00532 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CDKL1Q00532 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.71■□□□□ 0.59
CDKL1Q00532 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.71■□□□□ 0.59
CDKL1Q00532 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.71■□□□□ 0.59
CDKL1Q00532 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.71■□□□□ 0.59
CDKL1Q00532 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.71■□□□□ 0.59
CDKL1Q00532 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.71■□□□□ 0.59
CDKL1Q00532 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL1Q00532 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CDKL1Q00532 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.71■□□□□ 0.59
CDKL1Q00532 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.71■□□□□ 0.59
CDKL1Q00532 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL1Q00532 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL1Q00532 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CDKL1Q00532 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CDKL1Q00532 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL1Q00532 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDKL1Q00532 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL1Q00532 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL1Q00532 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL1Q00532 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL1Q00532 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CDKL1Q00532 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL1Q00532 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CDKL1Q00532 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL1Q00532 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.7■□□□□ 0.58
CDKL1Q00532 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.7■□□□□ 0.58
CDKL1Q00532 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.7■□□□□ 0.58
CDKL1Q00532 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.7■□□□□ 0.58
CDKL1Q00532 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.7■□□□□ 0.58
CDKL1Q00532 AL353708.3-201ENST00000610272 989 ntBASIC18.7■□□□□ 0.58
CDKL1Q00532 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL1Q00532 AL445675.2-201ENST00000620291 557 ntBASIC18.7■□□□□ 0.58
CDKL1Q00532 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.7■□□□□ 0.58
CDKL1Q00532 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL1Q00532 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL1Q00532 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.7■□□□□ 0.58
CDKL1Q00532 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CDKL1Q00532 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL1Q00532 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CDKL1Q00532 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.7■□□□□ 0.58
CDKL1Q00532 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDKL1Q00532 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL1Q00532 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.69■□□□□ 0.58
CDKL1Q00532 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL1Q00532 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.69■□□□□ 0.58
CDKL1Q00532 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL1Q00532 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.69■□□□□ 0.58
CDKL1Q00532 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL1Q00532 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.69■□□□□ 0.58
CDKL1Q00532 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL1Q00532 AC104581.1-202ENST00000635932 2618 ntBASIC18.69■□□□□ 0.58
CDKL1Q00532 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL1Q00532 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.69■□□□□ 0.58
CDKL1Q00532 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL1Q00532 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CDKL1Q00532 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDKL1Q00532 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms