Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.55□□□□□ -0.24
UBE2D3P61077 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2D3P61077 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D3P61077 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D3P61077 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.54□□□□□ -0.24
UBE2D3P61077 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D3P61077 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
UBE2D3P61077 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D3P61077 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D3P61077 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D3P61077 PRORSD1P-202ENST00000563365 2154 ntBASIC13.54□□□□□ -0.24
UBE2D3P61077 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
UBE2D3P61077 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.54□□□□□ -0.24
UBE2D3P61077 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
UBE2D3P61077 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D3P61077 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
UBE2D3P61077 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC13.54□□□□□ -0.24
UBE2D3P61077 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D3P61077 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D3P61077 TUBB8P6-201ENST00000436895 1288 ntBASIC13.54□□□□□ -0.24
UBE2D3P61077 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
UBE2D3P61077 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D3P61077 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.54□□□□□ -0.24
UBE2D3P61077 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.54□□□□□ -0.24
UBE2D3P61077 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
UBE2D3P61077 SOX15-203ENST00000570788 1093 ntBASIC13.54□□□□□ -0.24
UBE2D3P61077 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
UBE2D3P61077 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D3P61077 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D3P61077 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D3P61077 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D3P61077 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
UBE2D3P61077 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D3P61077 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
UBE2D3P61077 SDHAP1-207ENST00000440850 2000 ntBASIC13.54□□□□□ -0.24
UBE2D3P61077 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
UBE2D3P61077 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
UBE2D3P61077 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D3P61077 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
UBE2D3P61077 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D3P61077 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D3P61077 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D3P61077 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D3P61077 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC13.53□□□□□ -0.24
UBE2D3P61077 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D3P61077 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D3P61077 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D3P61077 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D3P61077 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.53□□□□□ -0.24
UBE2D3P61077 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D3P61077 AC098934.4-201ENST00000564127 592 ntBASIC13.53□□□□□ -0.24
UBE2D3P61077 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D3P61077 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.53□□□□□ -0.24
UBE2D3P61077 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC13.53□□□□□ -0.24
UBE2D3P61077 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC13.53□□□□□ -0.24
UBE2D3P61077 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.53□□□□□ -0.24
UBE2D3P61077 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.53□□□□□ -0.24
UBE2D3P61077 AC008687.6-201ENST00000596318 630 ntBASIC13.53□□□□□ -0.24
UBE2D3P61077 GXYLT1P5-201ENST00000614548 1189 ntBASIC13.53□□□□□ -0.24
UBE2D3P61077 AC133041.1-202ENST00000642053 222 ntBASIC13.53□□□□□ -0.24
UBE2D3P61077 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.53□□□□□ -0.24
UBE2D3P61077 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
UBE2D3P61077 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D3P61077 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D3P61077 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC13.53□□□□□ -0.24
UBE2D3P61077 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D3P61077 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
UBE2D3P61077 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D3P61077 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D3P61077 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.53□□□□□ -0.24
UBE2D3P61077 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D3P61077 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D3P61077 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
UBE2D3P61077 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D3P61077 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC13.53□□□□□ -0.24
UBE2D3P61077 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2D3P61077 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2D3P61077 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.52□□□□□ -0.24
UBE2D3P61077 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2D3P61077 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
UBE2D3P61077 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2D3P61077 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
UBE2D3P61077 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
UBE2D3P61077 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2D3P61077 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2D3P61077 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
UBE2D3P61077 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2D3P61077 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2D3P61077 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.52□□□□□ -0.24
UBE2D3P61077 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2D3P61077 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.52□□□□□ -0.24
UBE2D3P61077 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2D3P61077 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2D3P61077 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.52□□□□□ -0.25
UBE2D3P61077 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.52□□□□□ -0.25
UBE2D3P61077 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.52□□□□□ -0.25
UBE2D3P61077 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2D3P61077 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.52□□□□□ -0.25
UBE2D3P61077 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC13.52□□□□□ -0.25
UBE2D3P61077 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms