Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC24.37■■□□□ 1.49
EIF4A1P60842 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
EIF4A1P60842 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC24.37■■□□□ 1.49
EIF4A1P60842 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC24.37■■□□□ 1.49
EIF4A1P60842 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
EIF4A1P60842 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
EIF4A1P60842 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
EIF4A1P60842 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC24.37■■□□□ 1.49
EIF4A1P60842 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
EIF4A1P60842 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC24.37■■□□□ 1.49
EIF4A1P60842 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
EIF4A1P60842 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
EIF4A1P60842 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
EIF4A1P60842 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
EIF4A1P60842 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
EIF4A1P60842 FEM1AP3-201ENST00000403722 1741 ntBASIC24.36■■□□□ 1.49
EIF4A1P60842 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC24.36■■□□□ 1.49
EIF4A1P60842 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC24.36■■□□□ 1.49
EIF4A1P60842 FAM86EP-206ENST00000510506 987 ntBASIC24.36■■□□□ 1.49
EIF4A1P60842 HYMAI.1-201ENST00000620949 238 ntBASIC24.36■■□□□ 1.49
EIF4A1P60842 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC24.36■■□□□ 1.49
EIF4A1P60842 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
EIF4A1P60842 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC24.36■■□□□ 1.49
EIF4A1P60842 AC036111.1-201ENST00000533973 1582 ntBASIC24.36■■□□□ 1.49
EIF4A1P60842 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
EIF4A1P60842 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC24.36■■□□□ 1.49
EIF4A1P60842 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
EIF4A1P60842 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
EIF4A1P60842 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC24.35■■□□□ 1.49
EIF4A1P60842 IRX1P1-201ENST00000438849 1838 ntBASIC24.35■■□□□ 1.49
EIF4A1P60842 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
EIF4A1P60842 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
EIF4A1P60842 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
EIF4A1P60842 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
EIF4A1P60842 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
EIF4A1P60842 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
EIF4A1P60842 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
EIF4A1P60842 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
EIF4A1P60842 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
EIF4A1P60842 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
EIF4A1P60842 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
EIF4A1P60842 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC24.35■■□□□ 1.49
EIF4A1P60842 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC24.35■■□□□ 1.49
EIF4A1P60842 CD81-212ENST00000526072 1172 ntTSL 5 BASIC24.35■■□□□ 1.49
EIF4A1P60842 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC24.35■■□□□ 1.49
EIF4A1P60842 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC24.35■■□□□ 1.49
EIF4A1P60842 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC24.35■■□□□ 1.49
EIF4A1P60842 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC24.35■■□□□ 1.49
EIF4A1P60842 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
EIF4A1P60842 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC24.35■■□□□ 1.49
EIF4A1P60842 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC24.35■■□□□ 1.49
EIF4A1P60842 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
EIF4A1P60842 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
EIF4A1P60842 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
EIF4A1P60842 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC24.34■■□□□ 1.49
EIF4A1P60842 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC24.34■■□□□ 1.49
EIF4A1P60842 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC24.34■■□□□ 1.49
EIF4A1P60842 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
EIF4A1P60842 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
EIF4A1P60842 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
EIF4A1P60842 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
EIF4A1P60842 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
EIF4A1P60842 ADM-207ENST00000530439 1839 ntTSL 2 BASIC24.34■■□□□ 1.49
EIF4A1P60842 AC141586.3-201ENST00000562166 1838 ntBASIC24.34■■□□□ 1.49
EIF4A1P60842 BET1L-202ENST00000332865 533 ntTSL 5 BASIC24.34■■□□□ 1.49
EIF4A1P60842 GAD2-202ENST00000376248 680 ntTSL 5 BASIC24.34■■□□□ 1.49
EIF4A1P60842 STARP1-201ENST00000397973 869 ntBASIC24.34■■□□□ 1.49
EIF4A1P60842 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
EIF4A1P60842 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC24.34■■□□□ 1.49
EIF4A1P60842 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC24.34■■□□□ 1.49
EIF4A1P60842 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC24.34■■□□□ 1.49
EIF4A1P60842 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.34■■□□□ 1.49
EIF4A1P60842 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
EIF4A1P60842 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
EIF4A1P60842 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC24.34■■□□□ 1.49
EIF4A1P60842 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
EIF4A1P60842 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.49
EIF4A1P60842 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
EIF4A1P60842 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
EIF4A1P60842 UBQLN4P1-201ENST00000461599 1801 ntBASIC24.33■■□□□ 1.49
EIF4A1P60842 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
EIF4A1P60842 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
EIF4A1P60842 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
EIF4A1P60842 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
EIF4A1P60842 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC24.33■■□□□ 1.49
EIF4A1P60842 SPDYE15P-201ENST00000424157 909 ntBASIC24.33■■□□□ 1.49
EIF4A1P60842 MCCD1P1-208ENST00000445732 328 ntBASIC24.33■■□□□ 1.49
EIF4A1P60842 AL671277.2-201ENST00000458060 996 ntBASIC24.33■■□□□ 1.49
EIF4A1P60842 MIR3180-5-201ENST00000583743 153 ntBASIC24.33■■□□□ 1.49
EIF4A1P60842 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC24.33■■□□□ 1.49
EIF4A1P60842 AL121956.5-201ENST00000625261 221 ntBASIC24.33■■□□□ 1.49
EIF4A1P60842 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
EIF4A1P60842 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC24.33■■□□□ 1.49
EIF4A1P60842 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
EIF4A1P60842 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
EIF4A1P60842 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
EIF4A1P60842 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
EIF4A1P60842 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
EIF4A1P60842 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
EIF4A1P60842 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms