Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3EP60228 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.65■□□□□ 0.74
EIF3EP60228 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3EP60228 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3EP60228 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.65■□□□□ 0.74
EIF3EP60228 TSPY23P-201ENST00000440136 739 ntBASIC19.65■□□□□ 0.74
EIF3EP60228 KRT16P5-201ENST00000455284 522 ntBASIC19.65■□□□□ 0.74
EIF3EP60228 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.65■□□□□ 0.74
EIF3EP60228 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.65■□□□□ 0.74
EIF3EP60228 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.65■□□□□ 0.74
EIF3EP60228 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.65■□□□□ 0.74
EIF3EP60228 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3EP60228 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
EIF3EP60228 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.65■□□□□ 0.74
EIF3EP60228 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.65■□□□□ 0.74
EIF3EP60228 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3EP60228 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
EIF3EP60228 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
EIF3EP60228 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.65■□□□□ 0.74
EIF3EP60228 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
EIF3EP60228 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
EIF3EP60228 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
EIF3EP60228 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
EIF3EP60228 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
EIF3EP60228 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
EIF3EP60228 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EIF3EP60228 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
EIF3EP60228 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EIF3EP60228 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EIF3EP60228 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EIF3EP60228 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
EIF3EP60228 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.64■□□□□ 0.73
EIF3EP60228 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.64■□□□□ 0.73
EIF3EP60228 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EIF3EP60228 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.64■□□□□ 0.73
EIF3EP60228 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EIF3EP60228 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
EIF3EP60228 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EIF3EP60228 Z98044.1-201ENST00000632503 1764 ntBASIC19.64■□□□□ 0.73
EIF3EP60228 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.64■□□□□ 0.73
EIF3EP60228 AL512353.2-201ENST00000448759 1962 ntBASIC19.64■□□□□ 0.73
EIF3EP60228 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EIF3EP60228 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
EIF3EP60228 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.64■□□□□ 0.73
EIF3EP60228 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EIF3EP60228 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
EIF3EP60228 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
EIF3EP60228 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.64■□□□□ 0.73
EIF3EP60228 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EIF3EP60228 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EIF3EP60228 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3EP60228 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.63■□□□□ 0.73
EIF3EP60228 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3EP60228 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3EP60228 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
EIF3EP60228 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3EP60228 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3EP60228 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
EIF3EP60228 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.63■□□□□ 0.73
EIF3EP60228 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3EP60228 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.63■□□□□ 0.73
EIF3EP60228 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.63■□□□□ 0.73
EIF3EP60228 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3EP60228 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
EIF3EP60228 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3EP60228 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3EP60228 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3EP60228 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3EP60228 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
EIF3EP60228 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.63■□□□□ 0.73
EIF3EP60228 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.63■□□□□ 0.73
EIF3EP60228 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3EP60228 AC124016.1-201ENST00000609552 612 ntBASIC19.63■□□□□ 0.73
EIF3EP60228 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.63■□□□□ 0.73
EIF3EP60228 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3EP60228 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3EP60228 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
EIF3EP60228 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.63■□□□□ 0.73
EIF3EP60228 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3EP60228 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
EIF3EP60228 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3EP60228 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3EP60228 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
EIF3EP60228 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.63■□□□□ 0.73
EIF3EP60228 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3EP60228 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3EP60228 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.62■□□□□ 0.73
EIF3EP60228 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
EIF3EP60228 KRT8P41-201ENST00000533985 1514 ntBASIC19.62■□□□□ 0.73
EIF3EP60228 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3EP60228 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3EP60228 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3EP60228 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3EP60228 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.62■□□□□ 0.73
EIF3EP60228 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.62■□□□□ 0.73
EIF3EP60228 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3EP60228 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3EP60228 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.62■□□□□ 0.73
EIF3EP60228 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EIF3EP60228 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms