Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.98■□□□□ 0.31
CAV3P56539 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CAV3P56539 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CAV3P56539 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAV3P56539 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.97■□□□□ 0.31
CAV3P56539 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CAV3P56539 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAV3P56539 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAV3P56539 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAV3P56539 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CAV3P56539 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.97■□□□□ 0.31
CAV3P56539 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAV3P56539 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CAV3P56539 AC093787.1-201ENST00000450396 207 ntBASIC16.97■□□□□ 0.31
CAV3P56539 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.97■□□□□ 0.31
CAV3P56539 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CAV3P56539 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CAV3P56539 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.97■□□□□ 0.31
CAV3P56539 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CAV3P56539 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAV3P56539 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.97■□□□□ 0.31
CAV3P56539 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.97■□□□□ 0.31
CAV3P56539 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAV3P56539 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CAV3P56539 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CAV3P56539 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.97■□□□□ 0.31
CAV3P56539 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAV3P56539 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAV3P56539 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAV3P56539 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CAV3P56539 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CAV3P56539 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAV3P56539 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
CAV3P56539 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CAV3P56539 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.96■□□□□ 0.31
CAV3P56539 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CAV3P56539 MKRN4P-201ENST00000444706 1521 ntBASIC16.96■□□□□ 0.31
CAV3P56539 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
CAV3P56539 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.96■□□□□ 0.31
CAV3P56539 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAV3P56539 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAV3P56539 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
CAV3P56539 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.96■□□□□ 0.31
CAV3P56539 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.96■□□□□ 0.31
CAV3P56539 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.96■□□□□ 0.31
CAV3P56539 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.96■□□□□ 0.31
CAV3P56539 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.96■□□□□ 0.31
CAV3P56539 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.96■□□□□ 0.31
CAV3P56539 CYP2T3P-201ENST00000601990 817 ntBASIC16.96■□□□□ 0.31
CAV3P56539 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.96■□□□□ 0.31
CAV3P56539 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.96■□□□□ 0.31
CAV3P56539 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAV3P56539 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CAV3P56539 AC020916.1-201ENST00000587762 1774 ntBASIC16.96■□□□□ 0.31
CAV3P56539 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.96■□□□□ 0.31
CAV3P56539 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CAV3P56539 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
CAV3P56539 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAV3P56539 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
CAV3P56539 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAV3P56539 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CAV3P56539 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.96■□□□□ 0.3
CAV3P56539 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CAV3P56539 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.96■□□□□ 0.3
CAV3P56539 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CAV3P56539 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAV3P56539 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAV3P56539 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAV3P56539 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CAV3P56539 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.95■□□□□ 0.3
CAV3P56539 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAV3P56539 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAV3P56539 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAV3P56539 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAV3P56539 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAV3P56539 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAV3P56539 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAV3P56539 SLC29A4P1-201ENST00000398760 971 ntBASIC16.95■□□□□ 0.3
CAV3P56539 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAV3P56539 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.95■□□□□ 0.3
CAV3P56539 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.95■□□□□ 0.3
CAV3P56539 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.95■□□□□ 0.3
CAV3P56539 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.95■□□□□ 0.3
CAV3P56539 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.95■□□□□ 0.3
CAV3P56539 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.95■□□□□ 0.3
CAV3P56539 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.95■□□□□ 0.3
CAV3P56539 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.95■□□□□ 0.3
CAV3P56539 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
CAV3P56539 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.95■□□□□ 0.3
CAV3P56539 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAV3P56539 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAV3P56539 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAV3P56539 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAV3P56539 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAV3P56539 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CAV3P56539 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAV3P56539 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CAV3P56539 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.94■□□□□ 0.3
CAV3P56539 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAV3P56539 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms