Protein–RNA interactions for Protein: P55769

SNU13, NHP2-like protein 1, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13P55769 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNU13P55769 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNU13P55769 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNU13P55769 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SNU13P55769 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNU13P55769 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.42■□□□□ 0.22
SNU13P55769 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SNU13P55769 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.42■□□□□ 0.22
SNU13P55769 ZNF815P-204ENST00000434898 1737 ntBASIC16.42■□□□□ 0.22
SNU13P55769 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.42■□□□□ 0.22
SNU13P55769 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNU13P55769 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SNU13P55769 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNU13P55769 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNU13P55769 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SNU13P55769 AC007613.1-201ENST00000572811 2597 ntBASIC16.41■□□□□ 0.22
SNU13P55769 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNU13P55769 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNU13P55769 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNU13P55769 TEX21P-204ENST00000641479 1693 ntBASIC16.41■□□□□ 0.22
SNU13P55769 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNU13P55769 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNU13P55769 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNU13P55769 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SNU13P55769 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNU13P55769 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNU13P55769 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SNU13P55769 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNU13P55769 RNA5SP413-201ENST00000516373 109 ntBASIC16.41■□□□□ 0.22
SNU13P55769 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNU13P55769 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.41■□□□□ 0.22
SNU13P55769 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SNU13P55769 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNU13P55769 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SNU13P55769 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNU13P55769 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNU13P55769 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
SNU13P55769 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNU13P55769 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SNU13P55769 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SNU13P55769 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNU13P55769 AL049812.1-201ENST00000432563 2267 ntBASIC16.4■□□□□ 0.22
SNU13P55769 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNU13P55769 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNU13P55769 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SNU13P55769 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.4■□□□□ 0.22
SNU13P55769 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SNU13P55769 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNU13P55769 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNU13P55769 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNU13P55769 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.4■□□□□ 0.22
SNU13P55769 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNU13P55769 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNU13P55769 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SNU13P55769 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.4■□□□□ 0.22
SNU13P55769 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
SNU13P55769 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.4■□□□□ 0.22
SNU13P55769 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.4■□□□□ 0.22
SNU13P55769 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.4■□□□□ 0.22
SNU13P55769 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.4■□□□□ 0.22
SNU13P55769 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.4■□□□□ 0.22
SNU13P55769 AC142086.2-201ENST00000569753 217 ntBASIC16.4■□□□□ 0.22
SNU13P55769 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNU13P55769 AC006333.2-201ENST00000607957 2099 ntBASIC16.4■□□□□ 0.22
SNU13P55769 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNU13P55769 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SNU13P55769 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SNU13P55769 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNU13P55769 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNU13P55769 AC141586.3-201ENST00000562166 1838 ntBASIC16.4■□□□□ 0.22
SNU13P55769 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNU13P55769 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNU13P55769 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNU13P55769 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SNU13P55769 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SNU13P55769 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SNU13P55769 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNU13P55769 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SNU13P55769 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNU13P55769 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNU13P55769 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNU13P55769 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
SNU13P55769 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNU13P55769 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SNU13P55769 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SNU13P55769 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNU13P55769 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SNU13P55769 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNU13P55769 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNU13P55769 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNU13P55769 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNU13P55769 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNU13P55769 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNU13P55769 YBX1P10-201ENST00000444752 975 ntBASIC16.39■□□□□ 0.21
SNU13P55769 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.39■□□□□ 0.21
SNU13P55769 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.39■□□□□ 0.21
SNU13P55769 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.39■□□□□ 0.21
SNU13P55769 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNU13P55769 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNU13P55769 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms