Protein–RNA interactions for Protein: P49354

FNTA, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, humanhuman

Predictions only

Length 379 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNTAP49354 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
FNTAP49354 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
FNTAP49354 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.78■□□□□ 0.76
FNTAP49354 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.77■□□□□ 0.76
FNTAP49354 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FNTAP49354 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FNTAP49354 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
FNTAP49354 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FNTAP49354 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FNTAP49354 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.77■□□□□ 0.76
FNTAP49354 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
FNTAP49354 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.77■□□□□ 0.76
FNTAP49354 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
FNTAP49354 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.77■□□□□ 0.76
FNTAP49354 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
FNTAP49354 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.77■□□□□ 0.76
FNTAP49354 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
FNTAP49354 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
FNTAP49354 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FNTAP49354 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
FNTAP49354 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.77■□□□□ 0.76
FNTAP49354 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
FNTAP49354 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FNTAP49354 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.77■□□□□ 0.76
FNTAP49354 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.77■□□□□ 0.76
FNTAP49354 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.77■□□□□ 0.76
FNTAP49354 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.77■□□□□ 0.76
FNTAP49354 AL121832.2-201ENST00000610979 668 ntBASIC19.77■□□□□ 0.76
FNTAP49354 AL121829.2-201ENST00000620908 328 ntBASIC19.77■□□□□ 0.76
FNTAP49354 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
FNTAP49354 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.77■□□□□ 0.76
FNTAP49354 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
FNTAP49354 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.77■□□□□ 0.76
FNTAP49354 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
FNTAP49354 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.77■□□□□ 0.75
FNTAP49354 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.77■□□□□ 0.75
FNTAP49354 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
FNTAP49354 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
FNTAP49354 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.76■□□□□ 0.75
FNTAP49354 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FNTAP49354 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
FNTAP49354 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FNTAP49354 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
FNTAP49354 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FNTAP49354 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FNTAP49354 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
FNTAP49354 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FNTAP49354 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.76■□□□□ 0.75
FNTAP49354 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
FNTAP49354 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
FNTAP49354 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FNTAP49354 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FNTAP49354 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FNTAP49354 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.76■□□□□ 0.75
FNTAP49354 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FNTAP49354 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FNTAP49354 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.76■□□□□ 0.75
FNTAP49354 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.76■□□□□ 0.75
FNTAP49354 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.76■□□□□ 0.75
FNTAP49354 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.76■□□□□ 0.75
FNTAP49354 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.76■□□□□ 0.75
FNTAP49354 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.76■□□□□ 0.75
FNTAP49354 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FNTAP49354 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.76■□□□□ 0.75
FNTAP49354 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FNTAP49354 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
FNTAP49354 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FNTAP49354 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
FNTAP49354 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FNTAP49354 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
FNTAP49354 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FNTAP49354 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FNTAP49354 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FNTAP49354 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
FNTAP49354 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
FNTAP49354 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FNTAP49354 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
FNTAP49354 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FNTAP49354 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
FNTAP49354 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
FNTAP49354 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FNTAP49354 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FNTAP49354 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FNTAP49354 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.75■□□□□ 0.75
FNTAP49354 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.75■□□□□ 0.75
FNTAP49354 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.75■□□□□ 0.75
FNTAP49354 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.75■□□□□ 0.75
FNTAP49354 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FNTAP49354 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FNTAP49354 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.75■□□□□ 0.75
FNTAP49354 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
FNTAP49354 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.75■□□□□ 0.75
FNTAP49354 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.75■□□□□ 0.75
FNTAP49354 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.75■□□□□ 0.75
FNTAP49354 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
FNTAP49354 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
FNTAP49354 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FNTAP49354 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FNTAP49354 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
FNTAP49354 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms