Protein–RNA interactions for Protein: P49279

SLC11A1, Natural resistance-associated macrophage protein 1, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC11A1P49279 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.25■□□□□ 0.83
SLC11A1P49279 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC11A1P49279 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC11A1P49279 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC11A1P49279 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC11A1P49279 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC11A1P49279 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC11A1P49279 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SLC11A1P49279 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.24■□□□□ 0.83
SLC11A1P49279 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC11A1P49279 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC11A1P49279 AC034232.1-201ENST00000506026 1064 ntBASIC20.24■□□□□ 0.83
SLC11A1P49279 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.24■□□□□ 0.83
SLC11A1P49279 MIR3180-5-201ENST00000583743 153 ntBASIC20.24■□□□□ 0.83
SLC11A1P49279 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.24■□□□□ 0.83
SLC11A1P49279 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC11A1P49279 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SLC11A1P49279 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.24■□□□□ 0.83
SLC11A1P49279 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC11A1P49279 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.24■□□□□ 0.83
SLC11A1P49279 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SLC11A1P49279 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC11A1P49279 TREX1-205ENST00000625293 1783 ntBASIC20.23■□□□□ 0.83
SLC11A1P49279 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC11A1P49279 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC11A1P49279 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC11A1P49279 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC11A1P49279 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC11A1P49279 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC11A1P49279 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SLC11A1P49279 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC11A1P49279 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC11A1P49279 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC11A1P49279 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC11A1P49279 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC11A1P49279 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC11A1P49279 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SLC11A1P49279 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC11A1P49279 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
SLC11A1P49279 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC11A1P49279 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC11A1P49279 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.23■□□□□ 0.83
SLC11A1P49279 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC11A1P49279 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC11A1P49279 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC11A1P49279 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC11A1P49279 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.23■□□□□ 0.83
SLC11A1P49279 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC11A1P49279 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC11A1P49279 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC11A1P49279 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SLC11A1P49279 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC11A1P49279 Z82202.1-201ENST00000623446 1880 ntBASIC20.22■□□□□ 0.83
SLC11A1P49279 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC11A1P49279 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC11A1P49279 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC11A1P49279 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC11A1P49279 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC11A1P49279 LINC01521-201ENST00000504184 1943 ntBASIC20.22■□□□□ 0.83
SLC11A1P49279 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC11A1P49279 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC11A1P49279 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC11A1P49279 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC11A1P49279 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC11A1P49279 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC11A1P49279 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC11A1P49279 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.22■□□□□ 0.83
SLC11A1P49279 CLEC4GP1-201ENST00000596555 870 ntBASIC20.22■□□□□ 0.83
SLC11A1P49279 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC11A1P49279 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC11A1P49279 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
SLC11A1P49279 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC11A1P49279 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC11A1P49279 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC11A1P49279 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC11A1P49279 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC11A1P49279 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC11A1P49279 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC11A1P49279 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC11A1P49279 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SLC11A1P49279 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC11A1P49279 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SLC11A1P49279 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC11A1P49279 AL645929.1-201ENST00000420084 975 ntBASIC20.21■□□□□ 0.83
SLC11A1P49279 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.21■□□□□ 0.83
SLC11A1P49279 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC11A1P49279 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.21■□□□□ 0.83
SLC11A1P49279 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC11A1P49279 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.21■□□□□ 0.83
SLC11A1P49279 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC11A1P49279 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.21■□□□□ 0.83
SLC11A1P49279 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC11A1P49279 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.21■□□□□ 0.83
SLC11A1P49279 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC11A1P49279 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC11A1P49279 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC11A1P49279 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
SLC11A1P49279 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC11A1P49279 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC11A1P49279 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms