Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A9P48067 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC6A9P48067 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SLC6A9P48067 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A9P48067 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A9P48067 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC6A9P48067 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC6A9P48067 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC6A9P48067 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A9P48067 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC6A9P48067 AC004264.1-201ENST00000608354 794 ntBASIC16.84■□□□□ 0.29
SLC6A9P48067 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A9P48067 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLC6A9P48067 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A9P48067 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC6A9P48067 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A9P48067 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
SLC6A9P48067 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A9P48067 AC104417.2-201ENST00000562989 1793 ntBASIC16.84■□□□□ 0.29
SLC6A9P48067 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A9P48067 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A9P48067 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A9P48067 SDHAP1-207ENST00000440850 2000 ntBASIC16.84■□□□□ 0.29
SLC6A9P48067 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A9P48067 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A9P48067 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A9P48067 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A9P48067 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC6A9P48067 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
SLC6A9P48067 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A9P48067 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC6A9P48067 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC6A9P48067 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SLC6A9P48067 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SLC6A9P48067 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC6A9P48067 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A9P48067 PRORSD1P-201ENST00000295112 541 ntBASIC16.83■□□□□ 0.28
SLC6A9P48067 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A9P48067 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC6A9P48067 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A9P48067 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A9P48067 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A9P48067 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC6A9P48067 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.83■□□□□ 0.28
SLC6A9P48067 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A9P48067 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A9P48067 AC128676.1-201ENST00000454392 318 ntBASIC16.83■□□□□ 0.28
SLC6A9P48067 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC6A9P48067 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A9P48067 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC6A9P48067 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.83■□□□□ 0.28
SLC6A9P48067 AC141586.3-201ENST00000562166 1838 ntBASIC16.83■□□□□ 0.28
SLC6A9P48067 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC6A9P48067 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC6A9P48067 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC6A9P48067 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SLC6A9P48067 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SLC6A9P48067 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SLC6A9P48067 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A9P48067 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A9P48067 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SLC6A9P48067 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A9P48067 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A9P48067 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SLC6A9P48067 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SLC6A9P48067 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
SLC6A9P48067 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A9P48067 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SLC6A9P48067 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC6A9P48067 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A9P48067 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC6A9P48067 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.82■□□□□ 0.28
SLC6A9P48067 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SLC6A9P48067 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC6A9P48067 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC6A9P48067 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A9P48067 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
SLC6A9P48067 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SLC6A9P48067 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A9P48067 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC6A9P48067 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC6A9P48067 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC6A9P48067 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A9P48067 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SLC6A9P48067 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A9P48067 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A9P48067 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC6A9P48067 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SLC6A9P48067 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC6A9P48067 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SLC6A9P48067 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SLC6A9P48067 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A9P48067 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A9P48067 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A9P48067 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC6A9P48067 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
SLC6A9P48067 AC239809.2-201ENST00000415381 517 ntBASIC16.81■□□□□ 0.28
SLC6A9P48067 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A9P48067 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC6A9P48067 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms