Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP8P40818 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.72■□□□□ 0.91
USP8P40818 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.72■□□□□ 0.91
USP8P40818 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP8P40818 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
USP8P40818 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP8P40818 AC020916.1-201ENST00000587762 1774 ntBASIC20.72■□□□□ 0.91
USP8P40818 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.72■□□□□ 0.91
USP8P40818 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP8P40818 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
USP8P40818 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
USP8P40818 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP8P40818 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.71■□□□□ 0.91
USP8P40818 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.71■□□□□ 0.91
USP8P40818 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.71■□□□□ 0.91
USP8P40818 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
USP8P40818 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
USP8P40818 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.71■□□□□ 0.91
USP8P40818 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP8P40818 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.71■□□□□ 0.91
USP8P40818 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
USP8P40818 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.71■□□□□ 0.91
USP8P40818 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.71■□□□□ 0.91
USP8P40818 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.71■□□□□ 0.91
USP8P40818 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.71■□□□□ 0.91
USP8P40818 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
USP8P40818 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP8P40818 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP8P40818 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP8P40818 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP8P40818 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP8P40818 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP8P40818 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP8P40818 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP8P40818 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.71■□□□□ 0.91
USP8P40818 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.71■□□□□ 0.91
USP8P40818 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.71■□□□□ 0.91
USP8P40818 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
USP8P40818 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.7■□□□□ 0.91
USP8P40818 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.7■□□□□ 0.9
USP8P40818 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.7■□□□□ 0.9
USP8P40818 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP8P40818 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP8P40818 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP8P40818 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP8P40818 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP8P40818 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.7■□□□□ 0.9
USP8P40818 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
USP8P40818 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP8P40818 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP8P40818 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.7■□□□□ 0.9
USP8P40818 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP8P40818 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
USP8P40818 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP8P40818 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP8P40818 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
USP8P40818 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP8P40818 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
USP8P40818 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP8P40818 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP8P40818 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP8P40818 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
USP8P40818 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
USP8P40818 RN7SL471P-201ENST00000580476 299 ntBASIC20.7■□□□□ 0.9
USP8P40818 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP8P40818 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP8P40818 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP8P40818 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
USP8P40818 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.7■□□□□ 0.9
USP8P40818 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.7■□□□□ 0.9
USP8P40818 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
USP8P40818 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP8P40818 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP8P40818 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.7■□□□□ 0.9
USP8P40818 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP8P40818 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.69■□□□□ 0.9
USP8P40818 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
USP8P40818 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP8P40818 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.69■□□□□ 0.9
USP8P40818 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
USP8P40818 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP8P40818 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP8P40818 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP8P40818 FAM201B-201ENST00000458407 597 ntBASIC20.69■□□□□ 0.9
USP8P40818 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.69■□□□□ 0.9
USP8P40818 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.69■□□□□ 0.9
USP8P40818 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP8P40818 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.69■□□□□ 0.9
USP8P40818 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.69■□□□□ 0.9
USP8P40818 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
USP8P40818 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.69■□□□□ 0.9
USP8P40818 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP8P40818 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP8P40818 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP8P40818 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP8P40818 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.68■□□□□ 0.9
USP8P40818 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.68■□□□□ 0.9
USP8P40818 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP8P40818 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
USP8P40818 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms