Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
VARSP26640 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VARSP26640 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VARSP26640 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VARSP26640 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VARSP26640 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VARSP26640 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.7■□□□□ 0.58
VARSP26640 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
VARSP26640 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VARSP26640 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VARSP26640 AC124016.1-201ENST00000609552 612 ntBASIC18.7■□□□□ 0.58
VARSP26640 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VARSP26640 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VARSP26640 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VARSP26640 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.7■□□□□ 0.58
VARSP26640 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VARSP26640 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
VARSP26640 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.7■□□□□ 0.58
VARSP26640 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VARSP26640 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VARSP26640 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VARSP26640 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
VARSP26640 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
VARSP26640 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.69■□□□□ 0.58
VARSP26640 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
VARSP26640 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VARSP26640 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VARSP26640 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.69■□□□□ 0.58
VARSP26640 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VARSP26640 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VARSP26640 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VARSP26640 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VARSP26640 RPS2P55-201ENST00000397318 883 ntBASIC18.69■□□□□ 0.58
VARSP26640 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.69■□□□□ 0.58
VARSP26640 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.69■□□□□ 0.58
VARSP26640 AC107956.1-201ENST00000494359 873 ntBASIC18.69■□□□□ 0.58
VARSP26640 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VARSP26640 BX088651.1-201ENST00000540551 451 ntBASIC18.69■□□□□ 0.58
VARSP26640 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
VARSP26640 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.69■□□□□ 0.58
VARSP26640 MIR4785-201ENST00000585005 73 ntBASIC18.69■□□□□ 0.58
VARSP26640 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
VARSP26640 AC004264.1-201ENST00000608354 794 ntBASIC18.69■□□□□ 0.58
VARSP26640 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.69■□□□□ 0.58
VARSP26640 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VARSP26640 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.69■□□□□ 0.58
VARSP26640 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VARSP26640 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VARSP26640 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VARSP26640 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.69■□□□□ 0.58
VARSP26640 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VARSP26640 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VARSP26640 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
VARSP26640 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VARSP26640 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.68■□□□□ 0.58
VARSP26640 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.68■□□□□ 0.58
VARSP26640 AC104417.2-201ENST00000562989 1793 ntBASIC18.68■□□□□ 0.58
VARSP26640 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.68■□□□□ 0.58
VARSP26640 FZD10-202ENST00000539839 3282 ntBASIC18.68■□□□□ 0.58
VARSP26640 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.68■□□□□ 0.58
VARSP26640 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VARSP26640 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VARSP26640 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VARSP26640 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
VARSP26640 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.68■□□□□ 0.58
VARSP26640 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
VARSP26640 AC133681.1-201ENST00000465482 601 ntBASIC18.68■□□□□ 0.58
VARSP26640 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.68■□□□□ 0.58
VARSP26640 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.68■□□□□ 0.58
VARSP26640 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.68■□□□□ 0.58
VARSP26640 AC010331.1-201ENST00000611423 582 ntBASIC18.68■□□□□ 0.58
VARSP26640 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VARSP26640 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
VARSP26640 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VARSP26640 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.68■□□□□ 0.58
VARSP26640 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VARSP26640 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VARSP26640 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
VARSP26640 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.68■□□□□ 0.58
VARSP26640 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.68■□□□□ 0.58
VARSP26640 SDHAP1-207ENST00000440850 2000 ntBASIC18.67■□□□□ 0.58
VARSP26640 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.67■□□□□ 0.58
VARSP26640 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.67■□□□□ 0.58
VARSP26640 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VARSP26640 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VARSP26640 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VARSP26640 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.67■□□□□ 0.58
VARSP26640 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.67■□□□□ 0.58
VARSP26640 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
VARSP26640 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VARSP26640 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
VARSP26640 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VARSP26640 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.67■□□□□ 0.58
VARSP26640 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VARSP26640 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.67■□□□□ 0.58
VARSP26640 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VARSP26640 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VARSP26640 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
VARSP26640 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VARSP26640 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms