Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC012618.2-201ENST00000428058 849 ntBASIC17.79■□□□□ 0.44
CHMP24386 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.79■□□□□ 0.44
CHMP24386 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP24386 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.79■□□□□ 0.44
CHMP24386 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.79■□□□□ 0.44
CHMP24386 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP24386 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP24386 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.79■□□□□ 0.44
CHMP24386 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP24386 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP24386 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP24386 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CHMP24386 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP24386 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP24386 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP24386 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CHMP24386 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CHMP24386 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CHMP24386 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP24386 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CHMP24386 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP24386 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CHMP24386 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP24386 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP24386 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.79■□□□□ 0.44
CHMP24386 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP24386 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CHMP24386 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP24386 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.78■□□□□ 0.44
CHMP24386 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
CHMP24386 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP24386 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMP24386 AC104581.1-202ENST00000635932 2618 ntBASIC17.78■□□□□ 0.44
CHMP24386 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP24386 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP24386 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP24386 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP24386 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP24386 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP24386 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP24386 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMP24386 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP24386 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP24386 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CHMP24386 YBX1P10-201ENST00000444752 975 ntBASIC17.78■□□□□ 0.44
CHMP24386 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMP24386 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMP24386 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP24386 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CHMP24386 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP24386 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CHMP24386 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP24386 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP24386 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP24386 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CHMP24386 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP24386 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMP24386 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP24386 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CHMP24386 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP24386 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CHMP24386 TEX21P-204ENST00000641479 1693 ntBASIC17.77■□□□□ 0.44
CHMP24386 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP24386 AC141586.3-201ENST00000562166 1838 ntBASIC17.77■□□□□ 0.44
CHMP24386 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP24386 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP24386 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CHMP24386 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMP24386 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP24386 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP24386 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP24386 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CHMP24386 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CHMP24386 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CHMP24386 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP24386 AL353807.1-201ENST00000427475 662 ntBASIC17.77■□□□□ 0.44
CHMP24386 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP24386 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMP24386 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CHMP24386 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CHMP24386 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMP24386 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CHMP24386 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.77■□□□□ 0.44
CHMP24386 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMP24386 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMP24386 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP24386 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CHMP24386 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP24386 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP24386 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP24386 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP24386 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CHMP24386 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP24386 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CHMP24386 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP24386 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CHMP24386 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP24386 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP24386 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP24386 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms