Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.99■□□□□ 0.79
PDGFRAP16234 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFRAP16234 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFRAP16234 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFRAP16234 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFRAP16234 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFRAP16234 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFRAP16234 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFRAP16234 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFRAP16234 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFRAP16234 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PDGFRAP16234 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PDGFRAP16234 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFRAP16234 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFRAP16234 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFRAP16234 AL355355.2-201ENST00000442321 338 ntBASIC19.99■□□□□ 0.79
PDGFRAP16234 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.99■□□□□ 0.79
PDGFRAP16234 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PDGFRAP16234 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFRAP16234 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.99■□□□□ 0.79
PDGFRAP16234 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.99■□□□□ 0.79
PDGFRAP16234 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PDGFRAP16234 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.99■□□□□ 0.79
PDGFRAP16234 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PDGFRAP16234 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFRAP16234 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFRAP16234 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PDGFRAP16234 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFRAP16234 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.98■□□□□ 0.79
PDGFRAP16234 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PDGFRAP16234 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFRAP16234 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFRAP16234 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PDGFRAP16234 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.98■□□□□ 0.79
PDGFRAP16234 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.98■□□□□ 0.79
PDGFRAP16234 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.98■□□□□ 0.79
PDGFRAP16234 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.98■□□□□ 0.79
PDGFRAP16234 AC011506.1-201ENST00000474329 610 ntBASIC19.98■□□□□ 0.79
PDGFRAP16234 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.98■□□□□ 0.79
PDGFRAP16234 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.98■□□□□ 0.79
PDGFRAP16234 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFRAP16234 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.98■□□□□ 0.79
PDGFRAP16234 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.98■□□□□ 0.79
PDGFRAP16234 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFRAP16234 AC011298.2-201ENST00000617989 482 ntBASIC19.98■□□□□ 0.79
PDGFRAP16234 AC130371.2-201ENST00000619443 611 ntBASIC19.98■□□□□ 0.79
PDGFRAP16234 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFRAP16234 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PDGFRAP16234 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFRAP16234 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.98■□□□□ 0.79
PDGFRAP16234 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFRAP16234 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PDGFRAP16234 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.98■□□□□ 0.79
PDGFRAP16234 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PDGFRAP16234 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.97■□□□□ 0.79
PDGFRAP16234 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFRAP16234 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFRAP16234 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFRAP16234 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFRAP16234 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PDGFRAP16234 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFRAP16234 KRT8P11-201ENST00000409686 1436 ntBASIC19.97■□□□□ 0.79
PDGFRAP16234 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFRAP16234 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PDGFRAP16234 TSPY15P-201ENST00000457163 923 ntBASIC19.97■□□□□ 0.79
PDGFRAP16234 AC008040.2-201ENST00000461049 708 ntBASIC19.97■□□□□ 0.79
PDGFRAP16234 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.97■□□□□ 0.79
PDGFRAP16234 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.97■□□□□ 0.79
PDGFRAP16234 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFRAP16234 AP003071.4-201ENST00000562276 1284 ntBASIC19.97■□□□□ 0.79
PDGFRAP16234 MIR6786-201ENST00000616843 113 ntBASIC19.97■□□□□ 0.79
PDGFRAP16234 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFRAP16234 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFRAP16234 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFRAP16234 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFRAP16234 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PDGFRAP16234 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
PDGFRAP16234 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFRAP16234 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFRAP16234 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PDGFRAP16234 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PDGFRAP16234 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFRAP16234 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFRAP16234 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFRAP16234 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.96■□□□□ 0.79
PDGFRAP16234 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFRAP16234 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.96■□□□□ 0.79
PDGFRAP16234 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.96■□□□□ 0.79
PDGFRAP16234 B3GAT3P1-201ENST00000471720 806 ntBASIC19.96■□□□□ 0.79
PDGFRAP16234 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.96■□□□□ 0.79
PDGFRAP16234 AL355075.4-201ENST00000554988 638 ntBASIC19.96■□□□□ 0.79
PDGFRAP16234 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFRAP16234 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.96■□□□□ 0.79
PDGFRAP16234 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
PDGFRAP16234 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PDGFRAP16234 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFRAP16234 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFRAP16234 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFRAP16234 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFRAP16234 TNXA-203ENST00000507684 2038 ntBASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms