Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.9■□□□□ 0.94
VTNP04004 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
VTNP04004 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VTNP04004 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
VTNP04004 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.89■□□□□ 0.94
VTNP04004 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
VTNP04004 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VTNP04004 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.89■□□□□ 0.93
VTNP04004 KRT18P38-201ENST00000449496 1282 ntBASIC20.89■□□□□ 0.93
VTNP04004 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.89■□□□□ 0.93
VTNP04004 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VTNP04004 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.89■□□□□ 0.93
VTNP04004 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.89■□□□□ 0.93
VTNP04004 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VTNP04004 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.89■□□□□ 0.93
VTNP04004 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.89■□□□□ 0.93
VTNP04004 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VTNP04004 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VTNP04004 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VTNP04004 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
VTNP04004 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
VTNP04004 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
VTNP04004 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.88■□□□□ 0.93
VTNP04004 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VTNP04004 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VTNP04004 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VTNP04004 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VTNP04004 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
VTNP04004 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.88■□□□□ 0.93
VTNP04004 HOMER2P1-201ENST00000455653 964 ntBASIC20.88■□□□□ 0.93
VTNP04004 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.88■□□□□ 0.93
VTNP04004 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.88■□□□□ 0.93
VTNP04004 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VTNP04004 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.88■□□□□ 0.93
VTNP04004 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.88■□□□□ 0.93
VTNP04004 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VTNP04004 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
VTNP04004 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VTNP04004 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VTNP04004 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.88■□□□□ 0.93
VTNP04004 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VTNP04004 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VTNP04004 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
VTNP04004 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.88■□□□□ 0.93
VTNP04004 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.88■□□□□ 0.93
VTNP04004 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VTNP04004 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VTNP04004 TEX21P-204ENST00000641479 1693 ntBASIC20.87■□□□□ 0.93
VTNP04004 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
VTNP04004 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VTNP04004 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
VTNP04004 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.87■□□□□ 0.93
VTNP04004 GCSHP2-201ENST00000560971 527 ntBASIC20.87■□□□□ 0.93
VTNP04004 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.87■□□□□ 0.93
VTNP04004 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.87■□□□□ 0.93
VTNP04004 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.87■□□□□ 0.93
VTNP04004 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VTNP04004 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VTNP04004 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VTNP04004 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VTNP04004 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VTNP04004 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTNP04004 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VTNP04004 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.86■□□□□ 0.93
VTNP04004 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.86■□□□□ 0.93
VTNP04004 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTNP04004 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTNP04004 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTNP04004 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.86■□□□□ 0.93
VTNP04004 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
VTNP04004 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VTNP04004 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTNP04004 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.86■□□□□ 0.93
VTNP04004 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.86■□□□□ 0.93
VTNP04004 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTNP04004 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.86■□□□□ 0.93
VTNP04004 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.86■□□□□ 0.93
VTNP04004 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.86■□□□□ 0.93
VTNP04004 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTNP04004 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
VTNP04004 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VTNP04004 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
VTNP04004 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTNP04004 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTNP04004 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTNP04004 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.86■□□□□ 0.93
VTNP04004 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VTNP04004 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.85■□□□□ 0.93
VTNP04004 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.85■□□□□ 0.93
VTNP04004 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
VTNP04004 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VTNP04004 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VTNP04004 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
VTNP04004 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VTNP04004 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VTNP04004 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.85■□□□□ 0.93
VTNP04004 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VTNP04004 AL023284.2-201ENST00000405850 579 ntBASIC20.85■□□□□ 0.93
VTNP04004 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.85■□□□□ 0.93
VTNP04004 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms