Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.94■□□□□ 0.78
APOEP02649 AP000525.1-201ENST00000608286 694 ntBASIC19.94■□□□□ 0.78
APOEP02649 AP000692.2-201ENST00000608391 879 ntBASIC19.94■□□□□ 0.78
APOEP02649 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
APOEP02649 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
APOEP02649 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
APOEP02649 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.94■□□□□ 0.78
APOEP02649 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
APOEP02649 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.94■□□□□ 0.78
APOEP02649 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.94■□□□□ 0.78
APOEP02649 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
APOEP02649 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
APOEP02649 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
APOEP02649 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
APOEP02649 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APOEP02649 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
APOEP02649 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APOEP02649 SDHAP1-207ENST00000440850 2000 ntBASIC19.93■□□□□ 0.78
APOEP02649 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APOEP02649 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.93■□□□□ 0.78
APOEP02649 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.93■□□□□ 0.78
APOEP02649 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.93■□□□□ 0.78
APOEP02649 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APOEP02649 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.93■□□□□ 0.78
APOEP02649 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APOEP02649 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APOEP02649 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APOEP02649 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
APOEP02649 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.93■□□□□ 0.78
APOEP02649 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.93■□□□□ 0.78
APOEP02649 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
APOEP02649 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
APOEP02649 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.93■□□□□ 0.78
APOEP02649 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.93■□□□□ 0.78
APOEP02649 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.93■□□□□ 0.78
APOEP02649 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.93■□□□□ 0.78
APOEP02649 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APOEP02649 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
APOEP02649 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
APOEP02649 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.93■□□□□ 0.78
APOEP02649 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APOEP02649 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
APOEP02649 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
APOEP02649 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.93■□□□□ 0.78
APOEP02649 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.93■□□□□ 0.78
APOEP02649 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APOEP02649 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APOEP02649 AC079598.2-202ENST00000546624 1451 ntBASIC19.92■□□□□ 0.78
APOEP02649 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
APOEP02649 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
APOEP02649 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
APOEP02649 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
APOEP02649 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.92■□□□□ 0.78
APOEP02649 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
APOEP02649 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APOEP02649 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
APOEP02649 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APOEP02649 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APOEP02649 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
APOEP02649 AC008040.2-201ENST00000461049 708 ntBASIC19.92■□□□□ 0.78
APOEP02649 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
APOEP02649 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.92■□□□□ 0.78
APOEP02649 AC097488.1-201ENST00000507834 756 ntBASIC19.92■□□□□ 0.78
APOEP02649 SLC25A1P4-201ENST00000567977 778 ntBASIC19.92■□□□□ 0.78
APOEP02649 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.92■□□□□ 0.78
APOEP02649 AC073912.3-201ENST00000624414 853 ntBASIC19.92■□□□□ 0.78
APOEP02649 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
APOEP02649 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APOEP02649 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APOEP02649 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APOEP02649 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APOEP02649 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
APOEP02649 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
APOEP02649 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
APOEP02649 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
APOEP02649 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
APOEP02649 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
APOEP02649 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.91■□□□□ 0.78
APOEP02649 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
APOEP02649 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
APOEP02649 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
APOEP02649 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.91■□□□□ 0.78
APOEP02649 MIR1238-201ENST00000408483 83 ntBASIC19.91■□□□□ 0.78
APOEP02649 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.91■□□□□ 0.78
APOEP02649 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.91■□□□□ 0.78
APOEP02649 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
APOEP02649 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
APOEP02649 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.91■□□□□ 0.78
APOEP02649 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
APOEP02649 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APOEP02649 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APOEP02649 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APOEP02649 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APOEP02649 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APOEP02649 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APOEP02649 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APOEP02649 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APOEP02649 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.91■□□□□ 0.78
APOEP02649 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
APOEP02649 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms