Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.64
GPC4O75487 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.64
GPC4O75487 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GPC4O75487 AC142381.4-202ENST00000563973 229 ntBASIC19.08■□□□□ 0.64
GPC4O75487 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.08■□□□□ 0.64
GPC4O75487 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.08■□□□□ 0.64
GPC4O75487 TMEM191A-211ENST00000637163 1067 ntBASIC19.08■□□□□ 0.64
GPC4O75487 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GPC4O75487 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
GPC4O75487 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GPC4O75487 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GPC4O75487 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GPC4O75487 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
GPC4O75487 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
GPC4O75487 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GPC4O75487 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
GPC4O75487 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GPC4O75487 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GPC4O75487 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.08■□□□□ 0.64
GPC4O75487 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GPC4O75487 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GPC4O75487 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.07■□□□□ 0.64
GPC4O75487 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.07■□□□□ 0.64
GPC4O75487 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GPC4O75487 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
GPC4O75487 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
GPC4O75487 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
GPC4O75487 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GPC4O75487 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GPC4O75487 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
GPC4O75487 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
GPC4O75487 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GPC4O75487 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
GPC4O75487 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
GPC4O75487 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.07■□□□□ 0.64
GPC4O75487 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.07■□□□□ 0.64
GPC4O75487 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.07■□□□□ 0.64
GPC4O75487 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GPC4O75487 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.07■□□□□ 0.64
GPC4O75487 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.07■□□□□ 0.64
GPC4O75487 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.07■□□□□ 0.64
GPC4O75487 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
GPC4O75487 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
GPC4O75487 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.07■□□□□ 0.64
GPC4O75487 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
GPC4O75487 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
GPC4O75487 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
GPC4O75487 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
GPC4O75487 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GPC4O75487 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
GPC4O75487 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GPC4O75487 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
GPC4O75487 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
GPC4O75487 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC4O75487 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.06■□□□□ 0.64
GPC4O75487 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
GPC4O75487 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC4O75487 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.06■□□□□ 0.64
GPC4O75487 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC4O75487 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC4O75487 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC4O75487 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
GPC4O75487 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC4O75487 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC4O75487 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
GPC4O75487 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
GPC4O75487 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.06■□□□□ 0.64
GPC4O75487 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.06■□□□□ 0.64
GPC4O75487 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
GPC4O75487 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
GPC4O75487 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.06■□□□□ 0.64
GPC4O75487 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.06■□□□□ 0.64
GPC4O75487 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.06■□□□□ 0.64
GPC4O75487 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC4O75487 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.06■□□□□ 0.64
GPC4O75487 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC4O75487 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC4O75487 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC4O75487 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC4O75487 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GPC4O75487 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
GPC4O75487 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GPC4O75487 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GPC4O75487 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GPC4O75487 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GPC4O75487 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GPC4O75487 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
GPC4O75487 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.05■□□□□ 0.64
GPC4O75487 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GPC4O75487 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GPC4O75487 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GPC4O75487 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GPC4O75487 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.05■□□□□ 0.64
GPC4O75487 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
GPC4O75487 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.05■□□□□ 0.64
GPC4O75487 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GPC4O75487 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.05■□□□□ 0.64
GPC4O75487 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GPC4O75487 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
GPC4O75487 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms