Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC28A2O43868 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SLC28A2O43868 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC28A2O43868 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC28A2O43868 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC28A2O43868 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC28A2O43868 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC28A2O43868 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC28A2O43868 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC28A2O43868 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC28A2O43868 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SLC28A2O43868 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC28A2O43868 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.33■□□□□ 0.53
SLC28A2O43868 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.33■□□□□ 0.53
SLC28A2O43868 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC28A2O43868 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC28A2O43868 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC28A2O43868 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC28A2O43868 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SLC28A2O43868 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
SLC28A2O43868 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC28A2O43868 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.33■□□□□ 0.52
SLC28A2O43868 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC28A2O43868 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.33■□□□□ 0.52
SLC28A2O43868 AL121829.2-201ENST00000620908 328 ntBASIC18.33■□□□□ 0.52
SLC28A2O43868 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC28A2O43868 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC28A2O43868 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC28A2O43868 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC28A2O43868 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SLC28A2O43868 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC28A2O43868 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC28A2O43868 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC28A2O43868 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SLC28A2O43868 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC28A2O43868 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SLC28A2O43868 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC28A2O43868 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC28A2O43868 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC28A2O43868 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC28A2O43868 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.32■□□□□ 0.52
SLC28A2O43868 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC28A2O43868 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC28A2O43868 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.32■□□□□ 0.52
SLC28A2O43868 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SLC28A2O43868 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SLC28A2O43868 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC28A2O43868 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC28A2O43868 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC28A2O43868 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC28A2O43868 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SLC28A2O43868 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC28A2O43868 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SLC28A2O43868 AC018553.1-201ENST00000616682 1458 ntBASIC18.32■□□□□ 0.52
SLC28A2O43868 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SLC28A2O43868 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC28A2O43868 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
SLC28A2O43868 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC28A2O43868 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
SLC28A2O43868 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SLC28A2O43868 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC28A2O43868 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC28A2O43868 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SLC28A2O43868 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC28A2O43868 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC28A2O43868 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC28A2O43868 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC28A2O43868 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC28A2O43868 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC28A2O43868 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC28A2O43868 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC28A2O43868 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC28A2O43868 AC063952.2-201ENST00000498792 1227 ntBASIC18.31■□□□□ 0.52
SLC28A2O43868 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC28A2O43868 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC28A2O43868 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC28A2O43868 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC28A2O43868 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC28A2O43868 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC28A2O43868 AC004264.1-201ENST00000608354 794 ntBASIC18.31■□□□□ 0.52
SLC28A2O43868 AP000550.4-202ENST00000639755 178 ntBASIC18.31■□□□□ 0.52
SLC28A2O43868 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC28A2O43868 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC28A2O43868 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC28A2O43868 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC28A2O43868 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SLC28A2O43868 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC28A2O43868 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SLC28A2O43868 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC28A2O43868 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC28A2O43868 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC28A2O43868 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC28A2O43868 BX323043.1-201ENST00000641006 1765 ntBASIC18.3■□□□□ 0.52
SLC28A2O43868 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC28A2O43868 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC28A2O43868 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC28A2O43868 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC28A2O43868 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
SLC28A2O43868 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SLC28A2O43868 BX664615.1-201ENST00000443558 458 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms