Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LDB2O43679 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.05■□□□□ 0.64
LDB2O43679 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LDB2O43679 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.05■□□□□ 0.64
LDB2O43679 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
LDB2O43679 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.05■□□□□ 0.64
LDB2O43679 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.05■□□□□ 0.64
LDB2O43679 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
LDB2O43679 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LDB2O43679 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LDB2O43679 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LDB2O43679 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.05■□□□□ 0.64
LDB2O43679 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LDB2O43679 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LDB2O43679 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LDB2O43679 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LDB2O43679 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.05■□□□□ 0.64
LDB2O43679 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
LDB2O43679 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LDB2O43679 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LDB2O43679 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.04■□□□□ 0.64
LDB2O43679 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LDB2O43679 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LDB2O43679 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.04■□□□□ 0.64
LDB2O43679 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LDB2O43679 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LDB2O43679 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LDB2O43679 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LDB2O43679 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LDB2O43679 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.04■□□□□ 0.64
LDB2O43679 FAM207BP-201ENST00000447172 505 ntBASIC19.04■□□□□ 0.64
LDB2O43679 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
LDB2O43679 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.04■□□□□ 0.64
LDB2O43679 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
LDB2O43679 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.04■□□□□ 0.64
LDB2O43679 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.04■□□□□ 0.64
LDB2O43679 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LDB2O43679 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LDB2O43679 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LDB2O43679 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LDB2O43679 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LDB2O43679 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LDB2O43679 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LDB2O43679 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LDB2O43679 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LDB2O43679 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
LDB2O43679 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LDB2O43679 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.03■□□□□ 0.64
LDB2O43679 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LDB2O43679 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LDB2O43679 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LDB2O43679 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LDB2O43679 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LDB2O43679 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.03■□□□□ 0.64
LDB2O43679 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LDB2O43679 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.03■□□□□ 0.64
LDB2O43679 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.03■□□□□ 0.64
LDB2O43679 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.03■□□□□ 0.64
LDB2O43679 CKBP1-201ENST00000565489 1086 ntBASIC19.03■□□□□ 0.64
LDB2O43679 AP000692.2-201ENST00000608391 879 ntBASIC19.03■□□□□ 0.64
LDB2O43679 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.03■□□□□ 0.64
LDB2O43679 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LDB2O43679 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.03■□□□□ 0.64
LDB2O43679 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
LDB2O43679 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.03■□□□□ 0.64
LDB2O43679 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LDB2O43679 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.02■□□□□ 0.64
LDB2O43679 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LDB2O43679 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LDB2O43679 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.02■□□□□ 0.64
LDB2O43679 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LDB2O43679 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LDB2O43679 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.02■□□□□ 0.64
LDB2O43679 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
LDB2O43679 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LDB2O43679 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.02■□□□□ 0.64
LDB2O43679 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.02■□□□□ 0.64
LDB2O43679 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
LDB2O43679 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
LDB2O43679 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
LDB2O43679 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LDB2O43679 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.02■□□□□ 0.64
LDB2O43679 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LDB2O43679 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.02■□□□□ 0.64
LDB2O43679 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.02■□□□□ 0.64
LDB2O43679 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.02■□□□□ 0.64
LDB2O43679 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LDB2O43679 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.02■□□□□ 0.64
LDB2O43679 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.02■□□□□ 0.64
LDB2O43679 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LDB2O43679 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LDB2O43679 AL020996.1-203ENST00000536896 2307 ntBASIC19.02■□□□□ 0.64
LDB2O43679 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.02■□□□□ 0.63
LDB2O43679 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.02■□□□□ 0.63
LDB2O43679 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LDB2O43679 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
LDB2O43679 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
LDB2O43679 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LDB2O43679 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LDB2O43679 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms