Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA1O15239 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA1O15239 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFA1O15239 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
NDUFA1O15239 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA1O15239 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA1O15239 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.04□□□□□ -0.32
NDUFA1O15239 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.04□□□□□ -0.32
NDUFA1O15239 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA1O15239 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NDUFA1O15239 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA1O15239 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
NDUFA1O15239 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA1O15239 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA1O15239 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA1O15239 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA1O15239 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA1O15239 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.04□□□□□ -0.32
NDUFA1O15239 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NDUFA1O15239 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.04□□□□□ -0.32
NDUFA1O15239 METTL26-203ENST00000397664 604 ntTSL 2 BASIC13.04□□□□□ -0.32
NDUFA1O15239 AC023632.3-201ENST00000521633 145 ntBASIC13.04□□□□□ -0.32
NDUFA1O15239 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
NDUFA1O15239 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA1O15239 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.04□□□□□ -0.32
NDUFA1O15239 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.04□□□□□ -0.32
NDUFA1O15239 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC13.04□□□□□ -0.32
NDUFA1O15239 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA1O15239 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA1O15239 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA1O15239 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NDUFA1O15239 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.04□□□□□ -0.32
NDUFA1O15239 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NDUFA1O15239 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC13.04□□□□□ -0.32
NDUFA1O15239 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA1O15239 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFA1O15239 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
NDUFA1O15239 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFA1O15239 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFA1O15239 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC13.03□□□□□ -0.32
NDUFA1O15239 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFA1O15239 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFA1O15239 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFA1O15239 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFA1O15239 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFA1O15239 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFA1O15239 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFA1O15239 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.03□□□□□ -0.32
NDUFA1O15239 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFA1O15239 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC13.03□□□□□ -0.32
NDUFA1O15239 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.03□□□□□ -0.32
NDUFA1O15239 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFA1O15239 AC006015.1-201ENST00000429970 570 ntBASIC13.03□□□□□ -0.32
NDUFA1O15239 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFA1O15239 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFA1O15239 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFA1O15239 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFA1O15239 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFA1O15239 ABALON-201ENST00000629058 1903 ntBASIC13.03□□□□□ -0.32
NDUFA1O15239 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFA1O15239 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
NDUFA1O15239 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC13.03□□□□□ -0.32
NDUFA1O15239 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFA1O15239 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFA1O15239 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
NDUFA1O15239 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC13.03□□□□□ -0.32
NDUFA1O15239 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFA1O15239 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
NDUFA1O15239 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFA1O15239 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFA1O15239 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
NDUFA1O15239 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.03□□□□□ -0.32
NDUFA1O15239 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.03□□□□□ -0.32
NDUFA1O15239 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFA1O15239 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
NDUFA1O15239 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC13.02□□□□□ -0.32
NDUFA1O15239 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC13.02□□□□□ -0.32
NDUFA1O15239 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NDUFA1O15239 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
NDUFA1O15239 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC13.02□□□□□ -0.32
NDUFA1O15239 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NDUFA1O15239 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NDUFA1O15239 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFA1O15239 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFA1O15239 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFA1O15239 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFA1O15239 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFA1O15239 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.02□□□□□ -0.33
NDUFA1O15239 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NDUFA1O15239 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.02□□□□□ -0.33
NDUFA1O15239 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.02□□□□□ -0.33
NDUFA1O15239 C2orf69P4-201ENST00000565394 541 ntBASIC13.02□□□□□ -0.33
NDUFA1O15239 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.02□□□□□ -0.33
NDUFA1O15239 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC13.02□□□□□ -0.33
NDUFA1O15239 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.02□□□□□ -0.33
NDUFA1O15239 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC13.02□□□□□ -0.33
NDUFA1O15239 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
NDUFA1O15239 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.02□□□□□ -0.33
NDUFA1O15239 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
NDUFA1O15239 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms