Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 RCC1-205ENST00000411533 1169 ntTSL 516.34■□□□□ 0.213e-6■□□□□ 8.1
NKRFO15226 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.26e-7■□□□□ 8.1
NKRFO15226 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.193e-6■□□□□ 8.1
NKRFO15226 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.17■□□□□ 0.183e-6■□□□□ 8.1
NKRFO15226 GATAD2B-210ENST00000637331 145 ntTSL 516.15■□□□□ 0.183e-6■□□□□ 8.1
NKRFO15226 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.173e-6■□□□□ 8.1
NKRFO15226 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.08■□□□□ 0.163e-6■□□□□ 8.1
NKRFO15226 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC15.66■□□□□ 0.13e-6■□□□□ 8.1
NKRFO15226 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.13e-6■□□□□ 8.1
NKRFO15226 ABI2-219ENST00000444584 563 ntTSL 515.65■□□□□ 0.13e-6■□□□□ 8.1
NKRFO15226 SLC19A1-206ENST00000460174 600 ntTSL 315.64■□□□□ 0.093e-6■□□□□ 8.1
NKRFO15226 SH2B2-203ENST00000617975 490 ntTSL 315.57■□□□□ 0.086e-7■□□□□ 8.1
NKRFO15226 DNAJB6-214ENST00000486083 699 ntTSL 515.5■□□□□ 0.073e-6■□□□□ 8.1
NKRFO15226 ABI2-205ENST00000376135 568 ntTSL 315.49■□□□□ 0.073e-6■□□□□ 8.1
NKRFO15226 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.063e-6■□□□□ 8.1
NKRFO15226 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.063e-6■□□□□ 8.1
NKRFO15226 JPT2-214ENST00000569765 782 ntTSL 2 BASIC15.4■□□□□ 0.062e-9■□□□□ 8.1
NKRFO15226 RTEL1-207ENST00000463361 575 ntTSL 415.38■□□□□ 0.053e-6■□□□□ 8.1
NKRFO15226 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.36■□□□□ 0.053e-6■□□□□ 8.1
NKRFO15226 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.054e-8■□□□□ 8.1
NKRFO15226 RTEL1-TNFRSF6B-203ENST00000492259 4824 ntAPPRIS ALT2 TSL 515.34■□□□□ 0.053e-6■□□□□ 8.1
NKRFO15226 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.043e-6■□□□□ 8.1
NKRFO15226 RCC1-207ENST00000427469 903 ntTSL 515.22■□□□□ 0.033e-6■□□□□ 8.1
NKRFO15226 SMYD2-204ENST00000471645 4732 ntTSL 1 (best)15.21■□□□□ 0.032e-10■□□□□ 8.1
NKRFO15226 RCC1-210ENST00000434290 1070 ntTSL 515.2■□□□□ 0.023e-6■□□□□ 8.1
NKRFO15226 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.19■□□□□ 0.026e-7■□□□□ 8.1
NKRFO15226 RCC1-206ENST00000419074 997 ntTSL 514.97□□□□□ -0.013e-6■□□□□ 8.1
NKRFO15226 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.96□□□□□ -0.013e-6■□□□□ 8.1
NKRFO15226 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.033e-6■□□□□ 8.1
NKRFO15226 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.033e-6■□□□□ 8.1
NKRFO15226 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.054e-8■□□□□ 8.1
NKRFO15226 IKBKG-202ENST00000422680 841 ntTSL 214.72□□□□□ -0.056e-7■□□□□ 8.1
NKRFO15226 SMYD2-206ENST00000491455 3809 ntTSL 214.49□□□□□ -0.092e-10■□□□□ 8.1
NKRFO15226 TTC39B-202ENST00000380850 3221 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.113e-6■□□□□ 8.1
NKRFO15226 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.113e-6■□□□□ 8.1
NKRFO15226 TTC39B-205ENST00000506891 900 ntTSL 1 (best)14.08□□□□□ -0.163e-6■□□□□ 8.1
NKRFO15226 JPT2-203ENST00000382711 894 ntTSL 4 BASIC13.88□□□□□ -0.192e-9■□□□□ 8.1
NKRFO15226 JPT2-206ENST00000562684 3185 ntTSL 2 BASIC13.85□□□□□ -0.192e-9■□□□□ 8.1
NKRFO15226 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.193e-6■□□□□ 8.1
NKRFO15226 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.73□□□□□ -0.213e-6■□□□□ 8.1
NKRFO15226 JPT2-201ENST00000248098 3718 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.212e-9■□□□□ 8.1
NKRFO15226 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.69□□□□□ -0.223e-6■□□□□ 8.1
NKRFO15226 TF-201ENST00000402696 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.234e-8■□□□□ 8.1
NKRFO15226 ABI2-224ENST00000494215 717 ntTSL 213.48□□□□□ -0.253e-6■□□□□ 8.1
NKRFO15226 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC13.47□□□□□ -0.253e-6■□□□□ 8.1
NKRFO15226 DNAJB6-205ENST00000437030 566 ntTSL 513.25□□□□□ -0.293e-6■□□□□ 8.1
NKRFO15226 DNAJB6-207ENST00000441291 614 ntTSL 313.05□□□□□ -0.323e-6■□□□□ 8.1
NKRFO15226 THOC7-204ENST00000469584 836 ntTSL 2 BASIC13.01□□□□□ -0.333e-6■□□□□ 8.1
NKRFO15226 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.332e-9■□□□□ 8.1
NKRFO15226 DNAJB6-203ENST00000417758 852 ntTSL 512.81□□□□□ -0.363e-6■□□□□ 8.1
NKRFO15226 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC12.73□□□□□ -0.373e-6■□□□□ 8.1
NKRFO15226 RCC1-204ENST00000398958 2715 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.393e-6■□□□□ 8.1
NKRFO15226 SLCO4A1-206ENST00000470412 986 ntTSL 512.49□□□□□ -0.413e-6■□□□□ 8.1
NKRFO15226 GATAD2B-201ENST00000368655 7478 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.443e-6■□□□□ 8.1
NKRFO15226 CAPZA2-201ENST00000361183 5182 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.496e-7■□□□□ 8.1
NKRFO15226 RCC1-203ENST00000373833 2844 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.563e-6■□□□□ 8.1
NKRFO15226 PDXK-209ENST00000467908 7194 ntTSL 3 BASIC11.58□□□□□ -0.562e-9■□□□□ 8.1
NKRFO15226 ABI2-211ENST00000422511 2718 ntTSL 5 BASIC11.13□□□□□ -0.633e-6■□□□□ 8.1
NKRFO15226 KDM3A-205ENST00000441719 8741 ntTSL 211.12□□□□□ -0.633e-6■□□□□ 8.1
NKRFO15226 JPT2-210ENST00000566925 570 ntTSL 411.02□□□□□ -0.652e-9■□□□□ 8.1
NKRFO15226 KDM3A-202ENST00000409064 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.683e-6■□□□□ 8.1
NKRFO15226 SH2B1-210ENST00000566176 546 ntTSL 410.72□□□□□ -0.691e-11■□□□□ 8.1
NKRFO15226 CAPZA2-211ENST00000484325 324 ntTSL 1 (best)10.53□□□□□ -0.726e-7■□□□□ 8.1
NKRFO15226 TF-209ENST00000475382 586 ntTSL 410.37□□□□□ -0.754e-8■□□□□ 8.1
NKRFO15226 DNAJB6-217ENST00000488001 551 ntTSL 410.31□□□□□ -0.763e-6■□□□□ 8.1
NKRFO15226 PUF60-210ENST00000527584 547 ntTSL 210.07□□□□□ -0.86e-7■□□□□ 8.1
NKRFO15226 GATAD2B-207ENST00000634791 642 ntTSL 39.81□□□□□ -0.843e-6■□□□□ 8.1
NKRFO15226 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC8.97□□□□□ -0.973e-6■□□□□ 8.1
NKRFO15226 CAPZA2-206ENST00000461878 621 ntTSL 1 (best)8.75□□□□□ -1.016e-7■□□□□ 8.1
NKRFO15226 TFP1-201ENST00000460564 572 ntTSL 4 BASIC8.21□□□□□ -1.14e-8■□□□□ 8.1
NKRFO15226 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.54□□□□□ -1.23e-6■□□□□ 8.1
NKRFO15226 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC7.23□□□□□ -1.256e-7■□□□□ 8.1
NKRFO15226 THOC7-202ENST00000464327 459 ntTSL 56.82□□□□□ -1.323e-6■□□□□ 8.1
NKRFO15226 CAPZA2-210ENST00000466023 626 ntTSL 36.5□□□□□ -1.376e-7■□□□□ 8.1
NKRFO15226 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.68□□□□□ -1.53e-6■□□□□ 8.1
NKRFO15226 CAPZA2-204ENST00000426421 1214 ntTSL 55.63□□□□□ -1.516e-7■□□□□ 8.1
NKRFO15226 CAPZA2-203ENST00000417431 517 ntTSL 35.38□□□□□ -1.556e-7■□□□□ 8.1
NKRFO15226 CAPZA2-208ENST00000464669 898 ntTSL 25.22□□□□□ -1.576e-7■□□□□ 8.1
NKRFO15226 CAPZA2-205ENST00000449080 814 ntTSL 55.08□□□□□ -1.66e-7■□□□□ 8.1
NKRFO15226 CAPZA2-207ENST00000464223 164 ntTSL 1 (best)4.78□□□□□ -1.646e-7■□□□□ 8.1
NKRFO15226 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.63□□□□□ -1.676e-7■□□□□ 8.1
NKRFO15226 NOTUM-202ENST00000425009 996 ntTSL 328.21■■■□□ 2.112e-7■□□□□ 8.1
NKRFO15226 NOTUM-203ENST00000477214 813 ntTSL 527.48■■□□□ 1.992e-7■□□□□ 8.1
NKRFO15226 GLI4-204ENST00000517530 563 ntTSL 225.15■■□□□ 1.622e-7■□□□□ 8.1
NKRFO15226 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.62e-7■□□□□ 8.1
NKRFO15226 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.442e-7■□□□□ 8.1
NKRFO15226 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.8■■□□□ 1.082e-7■□□□□ 8.1
NKRFO15226 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.58■■□□□ 1.042e-7■□□□□ 8.1
NKRFO15226 SLC22A7-204ENST00000436107 658 ntTSL 520.91■□□□□ 0.942e-7■□□□□ 8.1
NKRFO15226 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.752e-7■□□□□ 8.1
NKRFO15226 MGST2-203ENST00000503816 1780 ntTSL 518.36■□□□□ 0.532e-7■□□□□ 8.1
NKRFO15226 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.04■□□□□ 0.482e-7■□□□□ 8.1
NKRFO15226 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.372e-7■□□□□ 8.1
NKRFO15226 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.282e-7■□□□□ 8.1
NKRFO15226 SNHG10-204ENST00000555866 221 ntTSL 216.42■□□□□ 0.222e-7■□□□□ 8.1
NKRFO15226 SNHG10-203ENST00000554169 981 ntTSL 216.28■□□□□ 0.22e-7■□□□□ 8.1
NKRFO15226 SNHG10-202ENST00000553559 428 ntTSL 315.33■□□□□ 0.042e-7■□□□□ 8.1
NKRFO15226 GLI4-206ENST00000520021 361 ntTSL 313.32□□□□□ -0.282e-7■□□□□ 8.1
Retrieved 98 of 9,198 protein–RNA pairs in 32.2 ms