Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.87■□□□□ 0.61
TLR4O00206 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.87■□□□□ 0.61
TLR4O00206 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
TLR4O00206 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TLR4O00206 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.87■□□□□ 0.61
TLR4O00206 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TLR4O00206 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TLR4O00206 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.87■□□□□ 0.61
TLR4O00206 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TLR4O00206 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TLR4O00206 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TLR4O00206 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TLR4O00206 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TLR4O00206 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TLR4O00206 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.86■□□□□ 0.61
TLR4O00206 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TLR4O00206 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TLR4O00206 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TLR4O00206 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TLR4O00206 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.86■□□□□ 0.61
TLR4O00206 AP000523.1-201ENST00000398242 1049 ntBASIC18.86■□□□□ 0.61
TLR4O00206 PCED1CP-201ENST00000419887 785 ntBASIC18.86■□□□□ 0.61
TLR4O00206 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TLR4O00206 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.86■□□□□ 0.61
TLR4O00206 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.86■□□□□ 0.61
TLR4O00206 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.86■□□□□ 0.61
TLR4O00206 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.86■□□□□ 0.61
TLR4O00206 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.86■□□□□ 0.61
TLR4O00206 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.86■□□□□ 0.61
TLR4O00206 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.86■□□□□ 0.61
TLR4O00206 AC008622.2-201ENST00000617006 1229 ntBASIC18.86■□□□□ 0.61
TLR4O00206 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.86■□□□□ 0.61
TLR4O00206 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.86■□□□□ 0.61
TLR4O00206 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.86■□□□□ 0.61
TLR4O00206 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TLR4O00206 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TLR4O00206 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.86■□□□□ 0.61
TLR4O00206 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TLR4O00206 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TLR4O00206 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TLR4O00206 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TLR4O00206 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TLR4O00206 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TLR4O00206 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TLR4O00206 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TLR4O00206 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TLR4O00206 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TLR4O00206 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TLR4O00206 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.85■□□□□ 0.61
TLR4O00206 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.85■□□□□ 0.61
TLR4O00206 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TLR4O00206 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
TLR4O00206 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
TLR4O00206 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.85■□□□□ 0.61
TLR4O00206 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TLR4O00206 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TLR4O00206 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TLR4O00206 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.85■□□□□ 0.61
TLR4O00206 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TLR4O00206 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TLR4O00206 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TLR4O00206 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TLR4O00206 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TLR4O00206 AL671277.2-201ENST00000458060 996 ntBASIC18.85■□□□□ 0.61
TLR4O00206 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.85■□□□□ 0.61
TLR4O00206 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.85■□□□□ 0.61
TLR4O00206 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TLR4O00206 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TLR4O00206 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
TLR4O00206 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TLR4O00206 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TLR4O00206 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TLR4O00206 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TLR4O00206 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TLR4O00206 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TLR4O00206 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.84■□□□□ 0.61
TLR4O00206 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TLR4O00206 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.84■□□□□ 0.61
TLR4O00206 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.84■□□□□ 0.61
TLR4O00206 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.84■□□□□ 0.61
TLR4O00206 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
TLR4O00206 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.84■□□□□ 0.61
TLR4O00206 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.84■□□□□ 0.61
TLR4O00206 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.84■□□□□ 0.61
TLR4O00206 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.84■□□□□ 0.61
TLR4O00206 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.84■□□□□ 0.61
TLR4O00206 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.84■□□□□ 0.61
TLR4O00206 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TLR4O00206 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
TLR4O00206 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TLR4O00206 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TLR4O00206 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TLR4O00206 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TLR4O00206 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
TLR4O00206 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TLR4O00206 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TLR4O00206 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TLR4O00206 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TLR4O00206 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TLR4O00206 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms